myRT

myRT report for GCA_001708205.1_ASM170820v1

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Seq: KV757177.1 Streptococcus agalactiae strain M19 genomic scaffold Scaffold1, whole genome shotgun sequence (974690 bp)
Overview 1 RT 1: 601828-611997 bp 2 RT 2: 625132-630552 bp Neighborhood of RT #1 [601828, 611997] KOG1000 RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Neighborhood of RT #2 [625132, 630552] TraG-D_C RVT-GII T4SS-DNA_transf Feature: gene Location: 601828-602127 bp Feature: gene Location: 602198-603541 bp Feature: domain Description: KOG1000 Location: 602477-602792 bp Feature: domain Description: KOG1 000 Location: 602477-602792 bp Feature: gene Location: 603679-605457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 603940-604732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 603940-604732 bp Feature: domain Description: Intron_maturas2 Location: 604840-605068 bp Feature: domain Description: Intron_maturas2 Location: 604840-605068 bp Feature: domain Description: HNHc Note: nucleases Location: 605233-605419 bp Feature: domain Description: HNHc Note: nucleases Location: 605233-60541 9 bp Feature: gene Location: 605955-611396 bp Feature: domain Description: N6_Mtase Location: 607947-608538 bp Feature: domain Description: N6_Mtase Location: 607947-608538 bp Feature: domain Description: COG4646 Location: 609129-611253 bp Feature: domain Description: COG4646 Location: 6091 29-61 1 253 bp Feature: gene Location: 611446-611997 bp Feature: gene Location: 625132-625326 bp Feature: gene Location: 625392-625964 bp Feature: domain Description: TraG-D_C Location: 625425-625752 bp Feature: domain Description: TraG-D_C Location: 625425-625752 bp Feature: gene Location: 626038-627945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 626347-627103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 626347-6271 03 bp Feature: gene Location: 628697-630028 bp Feature: domain Description: T4SS-DNA_transf Location: 629051-629972 bp Feature: domain Description: T4SS-DNA_transf Location: 629051 -629972 bp Feature: gene Location: 630028-630552 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), TraG-D_C (pfam12696), T4SS-DNA_transf (pfam02534)