myRT

myRT report for GCA_001711255.1_ASM171125v1

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Seq: MDPH01000012.1 Listeria monocytogenes strain Lm78 contig000012, whole genome shotgun sequence (742861 bp)
Overview 1 RT 1: 586234-594036 bp Neighborhood of RT #1 [586234, 594065] COG4748 N6_Mtase YtxK RVT-Retrons DUF3130 DUF3958 Feature: gene Location: 586234-589182 bp Ori: ODE77371.1 Feature: domain Description: COG4748 Location: 586309-586708 bp Feature: domain Description: COG4748 Location: 586309-586708 bp Feature: domain Description: N6_Mtase Location: 587293-588217 bp Feature: domain Description: N6_Mtase Location: 587293-58821 7 bp Feature: gene Location: 589175-590782 bp Ori: ODE77372.1 Feature: domain Description: YtxK Location: 589205-590234 bp Feature: domain Description: YtxK Location: 589205-590234 bp Feature: gene Location: 591219-592946 bp Ori: ODE77373.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 591345-591945 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 591 345-591 945 bp Feature: gene Location: 593424-593708 bp Ori: ODE77374.1 Feature: domain Description: DUF3130 Location: 593427-593694 bp Feature: domain Description: DUF31 30 Location: 593427-593694 bp Feature: gene Location: 593709-594065 bp Ori: ODE77375.1 Feature: domain Description: DUF3958 Location: 593736-594036 bp Feature: domain Description: DUF3958 Location: 593736-594036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4748 (Uncharacterized protein, contains restriction enzyme R protein N terminal (HSDR_N) domain ), N6_Mtase (pfam02384), YtxK (COG0827), RVT-Retrons, DUF3130 (pfam11328), DUF3958 (pfam13125)