myRT

myRT report for GCA_001712525.1_ASM171252v1

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Seq: MDGW01000121.1 Shigella sp. FC1661 NODE_209, whole genome shotgun sequence (6844 bp)
Overview 1 RT 1: 4094-6668 bp Neighborhood of RT #1 [4094, 6694] COG3547 DDE_Tnp_IS66_C RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 4094-4579 bp Feature: domain Description: COG3547 Location: 4112-4565 bp Feature: domain Description: COG3547 Location: 41 1 2-4565 bp Feature: gene Location: 4606-4749 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4615-4726 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 461 5-4726 bp Feature: gene Location: 4868-6085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5054-5708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5054-5708 bp Feature: domain Description: GIIM Note: maturase Location: 5786-6008 bp Feature: domain Description: GIIM Note: maturase Location: 5786-6008 bp Feature: gene Location: 6563-6694 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6575-6668 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6575-6668 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050)

Seq: MDGW01000387.1 Shigella sp. FC1661 NODE_449, whole genome shotgun sequence (919 bp)
Overview 1 RT 1: 129-822 bp Neighborhood of RT #1 [129, 821] RVT-GII Feature: gene Location: 129-821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429-822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 9-82 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII