myRT

myRT report for GCA_001712855.1_ASM171285v1

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Seq: CP013830.1 Pasteurellaceae bacterium NI1060 genome (2554082 bp)
Overview 1 RT 1: 548803-557752 bp 2 RT 2: 672618-680028 bp Neighborhood of RT #1 [548803, 557766] gapA RVT_N RVT-GII GIIM HNHc FAA1 PRK14986 Neighborhood of RT #2 [672618, 680072] metH RVT-Retrons FepC Feature: gene Location: 548803-549822 bp Feature: domain Description: gapA Location: 548806-549805 bp Feature: domain Description: gapA Location: 548806-549805 bp Feature: gene Location: 551147-551278 bp Feature: gene Location: 551405-553132 bp Feature: RT Description: RVT_N Location: 551480-551723 bp Feature: RT Description: RVT_N Location: 551 480-551 723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 551768-552428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 551 768-552428 bp Feature: domain Description: GIIM Note: maturase Location: 552482-552713 bp Feature: domain Description: GIIM Note: maturase Location: 552482-55271 3 bp Feature: domain Description: HNHc Note: nucleases Location: 552938-553097 bp Feature: domain Description: HNHc Note: nucleases Location: 552938-553097 bp Feature: gene Location: 553422-555224 bp Feature: domain Description: FAA1 Location: 553437-555213 bp Feature: domain Description: FAA1 Location: 553437-55521 3 bp Feature: gene Location: 555301-557766 bp Feature: domain Description: PRK14986 Location: 555322-557752 bp Feature: domain Description: PRK1 4986 Location: 555322-557752 bp Feature: gene Location: 672618-676310 bp Feature: domain Description: metH Location: 672627-676290 bp Feature: domain Description: metH Location: 672627-676290 bp Feature: gene Location: 676511-677458 bp Feature: gene Location: 677459-678349 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 677558-678146 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 677558-6781 46 bp Feature: gene Location: 678836-679267 bp Feature: gene Location: 679335-680072 bp Feature: domain Description: FepC Location: 679338-680028 bp Feature: domain Description: FepC Location: 679338-680028 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gapA (PRK15425), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), FAA1 (COG1022), PRK14986 (glycogen phosphorylase; Provisional), metH (TIGR02082), RVT-Retrons, FepC (COG1120)