myRT

myRT report for GCA_001714685.2_ASM171468v2

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Seq: MDTP02000037.1 Methanosarcina sp. Ant1 MSANT_contig000037, whole genome shotgun sequence (25828 bp)
Overview 1 RT 1: 11089-13580 bp Neighborhood of RT #1 [11089, 13591] Cmr1 Cas6b_N Cas6b_C RVT-CRISPR GIIM Feature: gene Location: 11089-12189 bp Ori: OEU43549.1 Feature: domain Description: Cmr1 Location: 11095-11647 bp Feature: domain Description: Cmr1 Location: 1 1 095-1 1 647 bp Feature: gene Location: 12256-12930 bp Ori: OEU43550.1 Feature: domain Description: Cas6b_N Location: 12277-12577 bp Feature: domain Description: Cas6b_N Location: 1 2277-1 2577 bp Feature: domain Description: Cas6b_C Location: 12589-12922 bp Feature: domain Description: Cas6b_C Location: 1 2589-1 2922 bp Feature: gene Location: 13052-13591 bp Ori: OEU43556.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 13055-13292 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 3055-1 3292 bp Feature: domain Description: GIIM Note: maturase Location: 13448-13580 bp Feature: domain Description: GIIM Note: maturase Location: 1 3448-1 3580 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cmr1 (COG1367), Cas6b_N (pfam17955), Cas6b_C, RVT-CRISPR, GIIM (pfam08388)

Seq: MDTP02000133.1 Methanosarcina sp. Ant1 MSANT_contig000133, whole genome shotgun sequence (13278 bp)
Overview 1 RT 1: 8257-12489 bp Neighborhood of RT #1 [8257, 12668] HTH_ARAC RVT-GII GIIM RVT-GII GIIM Feature: gene Location: 8257-8823 bp Feature: gene Location: 8915-9280 bp Ori: OEU41716.1 Feature: domain Description: HTH_ARAC Location: 9023-9263 bp Feature: domain Description: HTH_ARAC Location: 902 3-92 63 bp Feature: gene Location: 9347-10765 bp Ori: OEU41717.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9701-10322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9701-1032 2 bp Feature: domain Description: GIIM Note: maturase Location: 10376-10586 bp Feature: domain Description: GIIM Note: maturase Location: 10376-10586 bp Feature: gene Location: 11250-12668 bp Ori: OEU41718.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11604-12225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11604-12 2 2 5 bp Feature: domain Description: GIIM Note: maturase Location: 12279-12489 bp Feature: domain Description: GIIM Note: maturase Location: 12 2 79-12 489 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARAC (smart00342), RVT-GII, GIIM (pfam08388)