myRT

myRT report for GCA_001715165.2_ASM171516v2

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Seq: MCFX02000002.1 Photobacterium damselae subsp. piscicida strain L091106-03H Scaffold02, whole genome shotgun sequence (529104 bp)

Associated domains:myRT Redoxin (pfam08534), HTH_1 (pfam00126), PBP2_CrgA_like (cd08422), RVT-GII, GIIM (pfam08388), InsA (COG3677), COG4337 (Uncharacterized protein ), PRK11639 (zinc uptake transcriptional repressor Zur), PRK11815 (tRNA dihydrouridine(20/20a) synthase DusA), pspG (PRK09459)
OMP_w_GlyGly (TIGR04219)

Seq: MCFX02000005.1 Photobacterium damselae subsp. piscicida strain L091106-03H Scaffold05, whole genome shotgun sequence (275735 bp)

Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), GalA (COG3345), DUF4344 (pfam14247), PRK05337 (beta-hexosaminidase; Provisional), COG3965 (Predicted Co/Zn/Cd cation transporter, cation efflux family ), PRK10190 (L,D-transpeptidase; Provisional)

Seq: MCFX02000001.1 Photobacterium damselae subsp. piscicida strain L091106-03H Scaffold01, whole genome shotgun sequence (2356202 bp)

Associated domains:myRT AbgT (COG2978), YdfG (COG4221), RVT-GII, GIIM (pfam08388), Acyl_transf_3 (pfam01757), DUF2500 (pfam10694), PRK13107 (preprotein translocase subunit SecA; Reviewed), InsA (COG3677), PRK10776 (8-oxo-dGTP diphosphatase MutT), PRK00418 (DNA gyrase inhibitor YacG)
PRK11664 (ATP-dependent RNA helicase HrpB; Provisional), HC2 (pfam07382), PBP_1b (TIGR02071), YggX (COG2924), PRK10880 (adenine DNA glycosylase), T1SS_rpt_143 (TIGR03660), YCCS (TIGR01666), PRK05560 (DNA gyrase subunit A; Validated), PRK05355 (3-phosphoserine/phosphohydroxythreonine transaminase), YddA (COG4178)
PRK03784 (vtamin B12-transporter permease; Provisional), PRK03695 (vitamin B12-transporter ATPase; Provisional), YccC (COG1289), potD (PRK09501), potC (PRK09500), potB (PRK09497), PqiA (pfam04403), PqiB (COG3008), PRK10807 (intermembrane transport protein PqiB), tand_rpt_95 (NF012211)
CADG (smart00736), molyb_mobA (TIGR02665), PRK14491 (putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoeA; Provisional), PRK10255 (PTS system N-acetyl glucosamine specific transporter subunits IIABC; Provisional), torC (TIGR02162), NapE (pfam06796), RplT (COG0292), rpmI (PRK00172), LPAM_1 (pfam08139), DUF3012 (pfam11216)
group_II_RT_mat (TIGR04416), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), PRK10801 (Tol-Pal system protein TolQ), thio_ybgC (TIGR02799), Cyd_oper_YbgE (pfam09600), COG4890 (Predicted outer membrane lipoprotein ), bacill_yteA (TIGR02890), DUF2057 (pfam09829), Porin_4 (pfam13609)
dinG (PRK11747), dapE_proteo (TIGR01246), DUF2897 (pfam11446), proA (TIGR00407), proB (TIGR01027)

Seq: MCFX02000004.1 Photobacterium damselae subsp. piscicida strain L091106-03H Scaffold04, whole genome shotgun sequence (280364 bp)

Associated domains:myRT INT_ICEBs1_C_like (cd01189), COG5340 (Transcriptional regulator, predicted component of viral defense system ), RVT-UG1, InsA (COG3677), Ribosomal_S4Pg (pfam11993)

Seq: MCFX02000003.1 Photobacterium damselae subsp. piscicida strain L091106-03H Scaffold03, whole genome shotgun sequence (368146 bp)

Associated domains:myRT PBP2_TAXI_TRAP_like_3 (cd13568), COG4666 (TRAP-type uncharacterized transport system, fused permease components ), RVT-GII, GIIM (pfam08388), InsA (COG3677), PRK05920 (aromatic acid decarboxylase; Validated)