myRT

myRT report for GCA_001718115.1_ASM171811v1

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Seq: LYZC01000001.1 Klebsiella pneumoniae strain 1194 Ctg_1, whole genome shotgun sequence (264555 bp)
Overview 1 RT 1: 261625-263645 bp Neighborhood of RT #1 [261625, 264498] Laminin_G_3 RVT-GII Feature: gene Location: 261625-262356 bp Ori: ODM69401.1 Feature: domain Description: Laminin_G_3 Location: 261961-262300 bp Feature: domain Description: Laminin_G_3 Location: 261 961 -262300 bp Feature: gene Location: 262353-262562 bp Feature: gene Location: 263015-264498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263417-263645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26341 7-263645 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII

Seq: LYZC01000033.1 Klebsiella pneumoniae strain 1194 scf_11, whole genome shotgun sequence (188640 bp)
Overview 1 RT 1: 49804-58365 bp Neighborhood of RT #1 [49804, 58400] Nuc_deoxyrib_tr RVT-Retrons AAA_15 DUF4917 Feature: gene Location: 49804-50034 bp Feature: gene Location: 50997-51866 bp Ori: ODM62307.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 51519-51690 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 51519-51690 bp Feature: gene Location: 52522-53622 bp Ori: ODM62308.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52705-53233 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52 705-532 33 bp Feature: gene Location: 53737-55983 bp Ori: ODM62309.1 Feature: domain Description: AAA_15 Location: 53740-54748 bp Feature: domain Description: AAA_15 Location: 53740-54748 bp Feature: gene Location: 57381-58400 bp Ori: ODM62310.1 Feature: domain Description: DUF4917 Location: 57441-58365 bp Feature: domain Description: DUF4917 Location: 57441-58365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175), DUF4917 (pfam16263)

Seq: LYZC01000006.1 Klebsiella pneumoniae strain 1194 plasmid unnamed5 Ctg_14_plasmid, whole genome shotgun sequence (9588 bp)
Overview 1 RT 1: 207-5270 bp Neighborhood of RT #1 [207, 5281] Phage_integrase COG3547 RVT-GII GIIM InsE Feature: gene Location: 207-494 bp Ori: ODM68290.1 Feature: domain Description: Phage_integrase Location: 294-381 bp Feature: domain Description: Phage_integrase Location: 294-3 81 bp Feature: gene Location: 794-1870 bp Ori: ODM68291.1 Feature: domain Description: COG3547 Location: 833-1754 bp Feature: domain Description: COG3 547 Location: 83 3 -1754 bp Feature: gene Location: 2412-3920 bp Ori: ODM68297.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2670-3402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2670-3 402 bp Feature: domain Description: GIIM Note: maturase Location: 3477-3675 bp Feature: domain Description: GIIM Note: maturase Location: 3 477-3 675 bp Feature: gene Location: 4566-4859 bp Feature: gene Location: 4979-5281 bp Ori: ODM68293.1 Feature: domain Description: InsE Location: 4988-5270 bp Feature: domain Description: InsE Location: 4988-5270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), InsE (COG2963)