myRT

myRT report for GCA_001720395.1_ASM172039v1

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Seq: MDTU01000002.1 Piscirickettsia litoralis strain Y2 scaffold00002, whole genome shotgun sequence (270422 bp)
Overview 1 RT 1: 188645-192100 bp Neighborhood of RT #1 [188645, 192100] doc_partner Doc RVT-Retrons Feature: gene Location: 188645-188890 bp Ori: ODN41594.1 Feature: domain Description: doc_partner Location: 188657-188867 bp Feature: domain Description: doc_partner Location: 1 88657-1 88867 bp Feature: gene Location: 188874-189257 bp Ori: ODN41595.1 Feature: domain Description: Doc Location: 188901-189249 bp Feature: domain Description: Doc Location: 1 88901 -1 89249 bp Feature: gene Location: 189275-190315 bp Ori: ODN41596.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 189434-190007 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 89434-1 90007 bp Feature: gene Location: 190546-191094 bp Feature: gene Location: 191795-192100 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT doc_partner (TIGR02609), Doc (COG3654), RVT-Retrons

Seq: MDTU01000001.1 Piscirickettsia litoralis strain Y2 scaffold00001, whole genome shotgun sequence (3047478 bp)
Overview 1 RT 1: 1489384-1493664 bp Neighborhood of RT #1 [1489384, 1493678] uraD_N-term-dom Acetyltransf_1 Acetyltransf_18 RVT-AbiP2 LipA Feature: gene Location: 1489384-1490286 bp Ori: ODN44027.1 Feature: domain Description: uraD_N-term-dom Location: 1489393-1490278 bp Feature: domain Description: uraD_N-term-dom Location: 1489393-14902 78 bp Feature: gene Location: 1490314-1491162 bp Ori: ODN42763.1 Feature: domain Description: Acetyltransf_1 Location: 1490377-1490665 bp Feature: domain Description: Acetyltransf_1 Location: 1490377-1490665 bp Feature: domain Description: Acetyltransf_18 Location: 1490776-1491139 bp Feature: domain Description: Acetyltransf_18 Location: 1490776-1491139 bp Feature: gene Location: 1491261-1491998 bp Ori: ODN42764.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1491603-1491990 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1491603-1491990 bp Feature: gene Location: 1491982-1492431 bp Feature: gene Location: 1492719-1493678 bp Ori: ODN42766.1 Feature: domain Description: LipA Location: 1492770-1493664 bp Feature: domain Description: LipA Location: 1492 770-1493664 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT uraD_N-term-dom (TIGR03212), Acetyltransf_1 (pfam00583), Acetyltransf_18 (pfam18014), RVT-AbiP2, LipA (COG0320)