myRT

myRT report for GCA_001720575.1_ASM172057v1

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Seq: MDWB01000003.1 Burkholderia cenocepacia strain GA_AUH_16 NODE_3_length_391838_cov_26.6683_ID_3408, whole genome shotgun sequence (391838 bp)
Overview 1 RT 1: 138207-143700 bp Neighborhood of RT #1 [138207, 143723] his_ut_repres FIN RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 138207-139124 bp Feature: domain Description: his_ut_repres Location: 138447-139119 bp Feature: domain Description: his_ut_repres Location: 1 38447-1 391 1 9 bp Feature: gene Location: 139443-139931 bp Feature: domain Description: FIN Location: 139545-139896 bp Feature: domain Description: FIN Location: 1 39545-1 39896 bp Feature: gene Location: 140185-141534 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 140650-141286 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 40650-1 41 286 bp Feature: gene Location: 141839-142189 bp Feature: domain Description: Histone_HNS Location: 141881-142118 bp Feature: domain Description: Histone_HNS Location: 1 41 881 -1 421 1 8 bp Feature: gene Location: 142488-143723 bp Feature: domain Description: MFS_MucK Location: 142566-143700 bp Feature: domain Description: MFS_MucK Location: 1 42566-1 43700 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)

Seq: MDWB01000072.1 Burkholderia cenocepacia strain GA_AUH_16 NODE_72_length_2483_cov_132.289_ID_3546, whole genome shotgun sequence (2483 bp)
Overview 1 RT 1: 145-2261 bp Neighborhood of RT #1 [145, 2261] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 145-1863 bp Feature: RT Description: RVT_N Location: 202-439 bp Feature: RT Description: RVT_N Location: 2 02 -439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 490-1141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 490-1141 bp Feature: domain Description: GIIM Note: maturase Location: 1195-1426 bp Feature: domain Description: GIIM Note: maturase Location: 1195-142 6 bp Feature: domain Description: HNHc Note: nucleases Location: 1660-1816 bp Feature: domain Description: HNHc Note: nucleases Location: 1660-1816 bp Feature: gene Location: 1918-2094 bp Feature: gene Location: 2133-2261 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)