myRT

myRT report for GCA_001720755.1_ASM172075v1

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Seq: MAGF01000056.1 Klebsiella pneumoniae strain CFSAN044570 CFSAN044570_6, whole genome shotgun sequence (288491 bp)
Overview 1 RT 1: 47427-55989 bp Neighborhood of RT #1 [47427, 56024] Nuc_deoxyrib_tr RVT-Retrons AAA_15 DUF4917 Feature: gene Location: 47427-47657 bp Feature: gene Location: 48620-49489 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 49142-49313 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 491 42-4931 3 bp Feature: gene Location: 50145-51245 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50328-50856 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50328-50856 bp Feature: gene Location: 51360-53606 bp Feature: domain Description: AAA_15 Location: 51363-52371 bp Feature: domain Description: AAA_1 5 Location: 51 363-52371 bp Feature: gene Location: 55005-56024 bp Feature: domain Description: DUF4917 Location: 55065-55989 bp Feature: domain Description: DUF491 7 Location: 55065-55989 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175), DUF4917 (pfam16263)

Seq: MAGF01000062.1 Klebsiella pneumoniae strain CFSAN044570 CFSAN044570_65, whole genome shotgun sequence (2818 bp)
Overview 1 RT 1: 1-2572 bp Neighborhood of RT #1 [1, 2658] N6_acetyl_AAC6 RVT-GII GIIM Arr-ms Feature: gene Location: 1-151 bp Feature: domain Description: N6_acetyl_AAC6 Location: 7-151 bp Feature: domain Description: N6_acetyl_AAC6 Location: 7-151 bp Feature: gene Location: 770-2125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1064-1688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1064-1688 bp Feature: domain Description: GIIM Note: maturase Location: 1727-1946 bp Feature: domain Description: GIIM Note: maturase Location: 172 7-1946 bp Feature: gene Location: 2206-2658 bp Feature: domain Description: Arr-ms Location: 2266-2572 bp Feature: domain Description: Arr-ms Location: 2 2 66-2 572 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arr-ms (pfam12120), RVT-GII, GIIM (pfam08388)

Seq: MAGF01000069.1 Klebsiella pneumoniae strain CFSAN044570 CFSAN044570_71, whole genome shotgun sequence (1914 bp)
Overview 1 RT 1: 372-1464 bp Neighborhood of RT #1 [372, 1856] RVT-GII Feature: gene Location: 372-1856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII