myRT

myRT report for GCA_001720815.1_ASM172081v1

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Seq: MAGH01000007.1 Klebsiella pneumoniae strain CFSAN044572 CFSAN044572_15, whole genome shotgun sequence (162121 bp)
Overview 1 RT 1: 1-3842 bp Neighborhood of RT #1 [1, 3844] N6_acetyl_AAC6 RVT-GII GIIM Arr-ms PRK15417 Feature: gene Location: 1-151 bp Feature: domain Description: N6_acetyl_AAC6 Location: 7-151 bp Feature: domain Description: N6_acetyl_AAC6 Location: 7-1 51 bp Feature: gene Location: 770-2125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1064-1688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 064-1 688 bp Feature: domain Description: GIIM Note: maturase Location: 1727-1946 bp Feature: domain Description: GIIM Note: maturase Location: 1 727-1 946 bp Feature: gene Location: 2206-2658 bp Feature: domain Description: Arr-ms Location: 2266-2572 bp Feature: domain Description: Arr-ms Location: 2266-2572 bp Feature: gene Location: 2831-3844 bp Feature: domain Description: PRK15417 Location: 2834-3842 bp Feature: domain Description: PRK1 541 7 Location: 2834-3842 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arr-ms (pfam12120), PRK15417 (integron integrase), RVT-GII, GIIM (pfam08388)

Seq: MAGH01000056.1 Klebsiella pneumoniae strain CFSAN044572 CFSAN044572_6, whole genome shotgun sequence (301843 bp)
Overview 1 RT 1: 194379-204593 bp Neighborhood of RT #1 [194379, 204628] a_cpa1 Nuc_deoxyrib_tr RVT-Retrons AAA_15 DUF4917 Feature: gene Location: 194379-196013 bp Feature: domain Description: a_cpa1 Location: 194406-196008 bp Feature: domain Description: a_cpa1 Location: 194406-196008 bp Feature: gene Location: 197224-198093 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 197746-197917 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 197746-197917 bp Feature: gene Location: 198749-199849 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 198932-199460 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 198932 -199460 bp Feature: gene Location: 199964-202210 bp Feature: domain Description: AAA_15 Location: 199967-200975 bp Feature: domain Description: AAA_15 Location: 199967-2 00975 bp Feature: gene Location: 203609-204628 bp Feature: domain Description: DUF4917 Location: 203669-204593 bp Feature: domain Description: DUF4917 Location: 2 03669-2 04593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT a_cpa1 (TIGR00831), Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175), DUF4917 (pfam16263)