myRT

myRT report for GCA_001720905.1_ASM172090v1

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Seq: MAGL01000007.1 Klebsiella pneumoniae strain CFSAN044565 CFSAN044565_15, whole genome shotgun sequence (151779 bp)
Overview 1 RT 1: 112850-121480 bp Neighborhood of RT #1 [112850, 121485] FimC FimD RVT-UG4 PRK09692 YqgA Feature: gene Location: 112850-113614 bp Ori: ODP18554.1 Feature: domain Description: FimC Location: 112895-113597 bp Feature: domain Description: FimC Location: 1 1 2895-1 1 3597 bp Feature: gene Location: 113661-116255 bp Ori: ODP18555.1 Feature: domain Description: FimD Location: 113703-116244 bp Feature: domain Description: FimD Location: 1 1 3703-1 1 6244 bp Feature: gene Location: 116252-118333 bp Ori: ODP18556.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116663-117107 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 6663-1 1 71 07 bp Feature: gene Location: 119010-120248 bp Feature: domain Description: PRK09692 Location: 119016-120198 bp Feature: domain Description: PRK09692 Location: 1 1 901 6-1 201 98 bp Feature: gene Location: 120772-121485 bp Ori: ODP18557.1 Feature: domain Description: YqgA Location: 120778-121480 bp Feature: domain Description: YqgA Location: 1 20778-1 21 480 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, PRK09692 (Integrase; provisional), YqgA (COG1811)

Seq: MAGL01000052.1 Klebsiella pneumoniae strain CFSAN044565 CFSAN044565_56, whole genome shotgun sequence (1915 bp)
Overview 1 RT 1: 371-1463 bp Neighborhood of RT #1 [371, 1855] RVT-GII Feature: gene Location: 371-1855 bp Ori: ODP10134.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 773-1463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 773-1463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MAGL01000026.1 Klebsiella pneumoniae strain CFSAN044565 CFSAN044565_32, whole genome shotgun sequence (57103 bp)
Overview 1 RT 1: 6630-12113 bp Neighborhood of RT #1 [6630, 12121] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 umuC Feature: gene Location: 6630-7301 bp Ori: ODP13920.1 Feature: domain Description: Plasmid_stab_B Location: 6645-6852 bp Feature: domain Description: Plasmid_stab_B Location: 6645-6852 bp Feature: domain Description: Plasmid_stab_B Location: 6957-7164 bp Feature: domain Description: Plasmid_stab_B Location: 6957-7164 bp Feature: gene Location: 7304-8278 bp Ori: ODP13921.1 Feature: domain Description: StbA Location: 7310-8255 bp Feature: domain Description: StbA Location: 73 10-8255 bp Feature: gene Location: 8524-10008 bp Ori: ODP13922.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8926-9616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8926-9616 bp Feature: gene Location: 10419-10850 bp Ori: ODP13923.1 Feature: domain Description: PRK10276 Location: 10470-10833 bp Feature: domain Description: PRK10276 Location: 10470-1083 3 bp Feature: gene Location: 10850-12121 bp Ori: ODP13924.1 Feature: domain Description: umuC Location: 10853-12113 bp Feature: domain Description: umuC Location: 10853 -12113 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)