myRT

myRT report for GCA_001721295.1_ASM172129v1

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Seq: MDDS01000004.1 Sphingomonas turrisvirgatae strain MCT13 MCT13_NODE_11_length_147599_cov_33.799_ID_739, whole genome shotgun sequence (147263 bp)
Overview 1 RT 1: 123837-130334 bp Neighborhood of RT #1 [123837, 130822] COG5489 Hypoth_Ymh RVT-Retrons ParB_N_like AlbA_2 Feature: gene Location: 123837-124136 bp Ori: ODP39604.1 Feature: domain Description: COG5489 Location: 123840-124134 bp Feature: domain Description: COG5489 Location: 1 23840-1 241 34 bp Feature: gene Location: 124520-125320 bp Ori: ODP39638.1 Feature: domain Description: Hypoth_Ymh Location: 124931-125291 bp Feature: domain Description: Hypoth_Ymh Location: 1 24931 -1 25291 bp Feature: gene Location: 125326-127062 bp Ori: ODP39605.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125461-126091 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 25461 -1 26091 bp Feature: gene Location: 127391-129466 bp Ori: ODP39606.1 Feature: domain Description: ParB_N_like Location: 127508-127757 bp Feature: domain Description: ParB_N_like Location: 1 27508-1 27757 bp Feature: gene Location: 129878-130822 bp Ori: ODP39607.1 Feature: domain Description: AlbA_2 Location: 129950-130334 bp Feature: domain Description: AlbA_2 Location: 1 29950-1 30334 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5489 (Uncharacterized conserved protein, DUF736 family ), Hypoth_Ymh (pfam09509), RVT-Retrons, ParB_N_like (cd16411), AlbA_2 (pfam04326)

Seq: MDDS01000007.1 Sphingomonas turrisvirgatae strain MCT13 MCT13_NODE_14_length_96800_cov_36.6056_ID_1561, whole genome shotgun sequence (96800 bp)
Overview 1 RT 1: 34408-36449 bp Neighborhood of RT #1 [34408, 36449] HTH_XRE RVT-Retrons Feature: gene Location: 34408-34611 bp Feature: gene Location: 34647-34952 bp Ori: ODP39156.1 Feature: domain Description: HTH_XRE Location: 34656-34821 bp Feature: domain Description: HTH_XRE Location: 34656-3482 1 bp Feature: gene Location: 34942-35814 bp Ori: ODP39157.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35089-35620 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35089-3562 0 bp Feature: gene Location: 35836-36093 bp Feature: gene Location: 36168-36449 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons