myRT

myRT report for GCA_001721555.1_ASM172155v1

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Seq: LZYN01000111.1 Klebsiella pneumoniae strain BA41763 NODE_1_length_515287_cov_12.776_ID_1, whole genome shotgun sequence (515287 bp)
Overview 1 RT 1: 140267-143113 bp Neighborhood of RT #1 [140267, 143115] RVT-Retrons DinI Feature: gene Location: 140267-140461 bp Feature: gene Location: 140460-140891 bp Feature: gene Location: 141028-141978 bp Ori: ODP79498.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 141208-141751 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 41 208-1 41 751 bp Feature: gene Location: 142066-142266 bp Feature: gene Location: 142885-143115 bp Ori: ODP79806.1 Feature: domain Description: DinI Location: 142930-143113 bp Feature: domain Description: DinI Location: 1 42930-1 431 1 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, DinI (pfam06183)

Seq: LZYN01000283.1 Klebsiella pneumoniae strain BA41763 NODE_66_length_16614_cov_9.73969_ID_131, whole genome shotgun sequence (16614 bp)
Overview 1 RT 1: 5906-10788 bp Neighborhood of RT #1 [5906, 10790] PRK15110 PRK09951 RVT-UG11 umuC Feature: gene Location: 5906-6870 bp Feature: domain Description: PRK15110 Location: 5909-6566 bp Feature: domain Description: PRK15110 Location: 5909-6566 bp Feature: gene Location: 7075-7743 bp Ori: ODP75507.1 Feature: domain Description: PRK09951 Location: 7078-7741 bp Feature: domain Description: PRK09951 Location: 7078-7741 bp Feature: gene Location: 7944-8723 bp Ori: ODP75516.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 8088-8544 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 8088-8544 bp Feature: gene Location: 9112-9369 bp Feature: gene Location: 9525-10790 bp Ori: ODP75509.1 Feature: domain Description: umuC Location: 9528-10788 bp Feature: domain Description: umuC Location: 952 8-10788 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15110 (peptide ABC transporter permease SapB), PRK09951 (hypothetical protein; Provisional), RVT-UG11, umuC (PRK03609)

Seq: LZYN01000007.1 Klebsiella pneumoniae strain BA41763 NODE_106_length_2697_cov_73.9457_ID_211, whole genome shotgun sequence (2697 bp)
Overview 1 RT 1: 98-2447 bp Neighborhood of RT #1 [98, 2626] N6_acetyl_AAC6 RVT-GII GIIM Feature: gene Location: 98-652 bp Ori: ODP81738.1 Feature: domain Description: N6_acetyl_AAC6 Location: 104-650 bp Feature: domain Description: N6_acetyl_AAC6 Location: 104-650 bp Feature: gene Location: 1271-2626 bp Ori: ODP81739.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1565-2189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1565-2189 bp Feature: domain Description: GIIM Note: maturase Location: 2228-2447 bp Feature: domain Description: GIIM Note: maturase Location: 2228-2447 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_acetyl_AAC6 (TIGR04431), RVT-GII, GIIM (pfam08388)