myRT

myRT report for GCA_001721585.1_ASM172158v1

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Seq: LZYA01000028.1 Klebsiella pneumoniae strain BA253 NODE_35_length_45540_cov_52.1938_ID_69, whole genome shotgun sequence (45540 bp)
Overview 1 RT 1: 14395-19869 bp Neighborhood of RT #1 [14395, 19883] HTH_XRE HTH_XRE RVT-UG2 traC_PFL_4706 conj_conj_conj_TIGR03751 Feature: gene Location: 14395-14625 bp Ori: ODP85013.1 Feature: domain Description: HTH_XRE Location: 14437-14605 bp Feature: domain Description: HTH_XRE Location: 1 4437-1 4605 bp Feature: gene Location: 14708-14935 bp Ori: ODP85014.1 Feature: domain Description: HTH_XRE Location: 14750-14912 bp Feature: domain Description: HTH_XRE Location: 1 4750-1 491 2 bp Feature: gene Location: 15133-16410 bp Ori: ODP85015.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 15331-16117 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 5331 -1 61 1 7 bp Feature: gene Location: 16897-19527 bp Ori: ODP85016.1 Feature: domain Description: traC_PFL_4706 Location: 16936-19516 bp Feature: domain Description: traC_PFL_4706 Location: 1 6936-1 951 6 bp Feature: gene Location: 19524-19883 bp Ori: ODP85017.1 Feature: domain Description: conj_conj_conj_TIGR03751 Location: 19542-19869 bp Feature: domain Description: conj_conj_conj_TIGR03751 Location: 1 9542-1 9869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-UG2, traC_PFL_4706 (TIGR03744), conj_conj_conj_TIGR03751

Seq: LZYA01000033.1 Klebsiella pneumoniae strain BA253 NODE_3_length_321707_cov_38.448_ID_5, whole genome shotgun sequence (321707 bp)
Overview 1 RT 1: 76928-85608 bp Neighborhood of RT #1 [76928, 85643] Nuc_deoxyrib_tr RVT-Retrons AAA_15 DUF4917 Feature: gene Location: 76928-77257 bp Feature: gene Location: 78239-79108 bp Ori: ODP84565.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 78761-78932 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 78761-78932 bp Feature: gene Location: 79764-80864 bp Ori: ODP84566.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 79944-80478 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 79944-80478 bp Feature: gene Location: 80979-83225 bp Ori: ODP84567.1 Feature: domain Description: AAA_15 Location: 80982-81990 bp Feature: domain Description: AAA_15 Location: 80982 -81990 bp Feature: gene Location: 84624-85643 bp Ori: ODP84568.1 Feature: domain Description: DUF4917 Location: 84684-85608 bp Feature: domain Description: DUF4917 Location: 84684-85608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175), DUF4917 (pfam16263)