myRT

myRT report for GCA_001722065.1_ASM172206v1

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Seq: MDUA01000006.1 Lactobacillus brevis strain DPC 6108 DPC6108_contig_4, whole genome shotgun sequence (46084 bp)
Overview 1 RT 1: 8402-19625 bp Neighborhood of RT #1 [8402, 19630] ParAB_family PinE RVT-GII GIIM KxYKxGKxW MucBP MucBP MucBP Mub_B2 Mub_B2 Mub_B2 MucBP_2 Mub_B2 MucBP_2 Mub_B2 Mub_B2 MucBP_2 Mub_B2 Mub_B2 MucBP_2 Mub_B2 Mub_B2 MucBP_2 LPXTG_anchor Feature: gene Location: 8402-9193 bp Feature: domain Description: ParAB_family Location: 8411-9023 bp Feature: domain Description: ParAB_family Location: 841 1 -9023 bp Feature: gene Location: 9328-9912 bp Feature: domain Description: PinE Location: 9331-9904 bp Feature: domain Description: PinE Location: 9331 -9904 bp Feature: gene Location: 10450-11835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10771-11389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0771 -1 1 389 bp Feature: domain Description: GIIM Note: maturase Location: 11446-11671 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 446-1 1 671 bp Feature: gene Location: 11943-12284 bp Feature: gene Location: 12410-19630 bp Feature: domain Description: KxYKxGKxW Location: 12425-12491 bp Feature: domain Description: KxYKxGKxW Location: 1 2425-1 2491 bp Feature: domain Description: MucBP Location: 14003-14213 bp Feature: domain Description: MucBP Location: 1 4003-1 421 3 bp Feature: domain Description: MucBP Location: 14228-14435 bp Feature: domain Description: MucBP Location: 1 4228-1 4435 bp Feature: domain Description: MucBP Location: 14450-14648 bp Feature: domain Description: MucBP Location: 1 4450-1 4648 bp Feature: domain Description: Mub_B2 Location: 14678-14930 bp Feature: domain Description: Mub_B2 Location: 1 4678-1 4930 bp Feature: domain Description: Mub_B2 Location: 15056-15257 bp Feature: domain Description: Mub_B2 Location: 1 5056-1 5257 bp Feature: domain Description: Mub_B2 Location: 15353-15554 bp Feature: domain Description: Mub_B2 Location: 1 5353-1 5554 bp Feature: domain Description: MucBP_2 Location: 15635-15851 bp Feature: domain Description: MucBP_2 Location: 1 5635-1 5851 bp Feature: domain Description: Mub_B2 Location: 15878-16085 bp Feature: domain Description: Mub_B2 Location: 1 5878-1 6085 bp Feature: domain Description: MucBP_2 Location: 16166-16382 bp Feature: domain Description: MucBP_2 Location: 1 61 66-1 6382 bp Feature: domain Description: Mub_B2 Location: 16496-16748 bp Feature: domain Description: Mub_B2 Location: 1 6496-1 6748 bp Feature: domain Description: Mub_B2 Location: 16943-17150 bp Feature: domain Description: Mub_B2 Location: 1 6943-1 71 50 bp Feature: domain Description: MucBP_2 Location: 17228-17447 bp Feature: domain Description: MucBP_2 Location: 1 7228-1 7447 bp Feature: domain Description: Mub_B2 Location: 17561-17813 bp Feature: domain Description: Mub_B2 Location: 1 7561 -1 781 3 bp Feature: domain Description: Mub_B2 Location: 18005-18212 bp Feature: domain Description: Mub_B2 Location: 1 8005-1 821 2 bp Feature: domain Description: MucBP_2 Location: 18293-18512 bp Feature: domain Description: MucBP_2 Location: 1 8293-1 851 2 bp Feature: domain Description: Mub_B2 Location: 18539-18740 bp Feature: domain Description: Mub_B2 Location: 1 8539-1 8740 bp Feature: domain Description: Mub_B2 Location: 18836-19037 bp Feature: domain Description: Mub_B2 Location: 1 8836-1 9037 bp Feature: domain Description: MucBP_2 Location: 19124-19298 bp Feature: domain Description: MucBP_2 Location: 1 91 24-1 9298 bp Feature: domain Description: LPXTG_anchor Location: 19511-19625 bp Feature: domain Description: LPXTG_anchor Location: 1 951 1 -1 9625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), KxYKxGKxW (TIGR03715), MucBP (pfam06458), Mub_B2 (pfam17966), MucBP_2 (pfam17965), LPXTG_anchor (TIGR01167), ParAB_family (cd02042), PinE (COG1961)