myRT

myRT report for GCA_001722405.1_ASM172240v1

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Seq: MIHG01000176.1 Mycobacterium gordonae strain HMC_M15 PROKKA_contig000176, whole genome shotgun sequence (14624 bp)
Overview 1 RT 1: 6694-13637 bp Neighborhood of RT #1 [6694, 13675] RnaI RVT-CRISPR-like AcrR COG3653 Feature: gene Location: 6694-7470 bp Ori: ODR17758.1 Feature: domain Description: RnaI Location: 6820-7360 bp Feature: domain Description: RnaI Location: 6820-7360 bp Feature: gene Location: 7659-9749 bp Feature: gene Location: 9700-11073 bp Ori: ODR17761.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 9982-10606 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 9982-1 0606 bp Feature: gene Location: 11234-11860 bp Ori: ODR17759.1 Feature: domain Description: AcrR Location: 11273-11768 bp Feature: domain Description: AcrR Location: 1 1 273-1 1 768 bp Feature: gene Location: 11900-13675 bp Ori: ODR17762.1 Feature: domain Description: COG3653 Location: 11906-13637 bp Feature: domain Description: COG3653 Location: 1 1 906-1 3637 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RnaI (COG3719), RVT-CRISPR, AcrR (COG1309), COG3653 (N-acyl-D-aspartate/D-glutamate deacylase )

Seq: MIHG01000016.1 Mycobacterium gordonae strain HMC_M15 PROKKA_contig000016, whole genome shotgun sequence (57074 bp)
Overview 1 RT 1: 51670-57037 bp Neighborhood of RT #1 [51670, 57037] DEDD_Tnp_IS110 Transposase_20 RVT_N RVT-GII GIIM Feature: gene Location: 51670-51993 bp Feature: gene Location: 52326-53564 bp Ori: ODR23250.1 Feature: domain Description: DEDD_Tnp_IS110 Location: 52338-52809 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 52 338-52 809 bp Feature: domain Description: Transposase_20 Location: 53151-53403 bp Feature: domain Description: Transposase_2 0 Location: 53151-53403 bp Feature: gene Location: 54277-56064 bp Ori: ODR23251.1 Feature: domain Description: RVT_N Location: 54307-54544 bp Feature: domain Description: RVT_N Location: 54307-54544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54604-55264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54604-552 64 bp Feature: domain Description: GIIM Note: maturase Location: 55333-55564 bp Feature: domain Description: GIIM Note: maturase Location: 55333-55564 bp Feature: gene Location: 56249-57037 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEDD_Tnp_IS110 (pfam01548), Transposase_20 (pfam02371), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MIHG01000147.1 Mycobacterium gordonae strain HMC_M15 PROKKA_contig000147, whole genome shotgun sequence (17751 bp)
Overview 1 RT 1: 2318-8170 bp Neighborhood of RT #1 [2318, 8181] MhpC RVT-GII GIIM TetR_N TetR_C_35 CypX Feature: gene Location: 2318-3214 bp Ori: ODR18370.1 Feature: domain Description: MhpC Location: 2342-3194 bp Feature: domain Description: MhpC Location: 23 42-3 194 bp Feature: gene Location: 3262-3477 bp Feature: gene Location: 4007-5455 bp Ori: ODR18372.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4325-5012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 25-5012 bp Feature: domain Description: GIIM Note: maturase Location: 5087-5282 bp Feature: domain Description: GIIM Note: maturase Location: 5087-5282 bp Feature: gene Location: 6202-6792 bp Ori: ODR18373.1 Feature: domain Description: TetR_N Location: 6220-6352 bp Feature: domain Description: TetR_N Location: 6220-63 52 bp Feature: domain Description: TetR_C_35 Location: 6421-6754 bp Feature: domain Description: TetR_C_3 5 Location: 6421-6754 bp Feature: gene Location: 6880-8181 bp Ori: ODR18374.1 Feature: domain Description: CypX Location: 6955-8170 bp Feature: domain Description: CypX Location: 6955-8170 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MhpC (COG0596), RVT-GII, GIIM (pfam08388), TetR_N (pfam00440), TetR_C_35 (pfam18556), CypX (COG2124)