myRT

myRT report for GCA_001722555.1_ASM172255v1

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Seq: MEHA01000005.1 Eisenbergiella tayi strain NML150140-1 BEI59_contig000005, whole genome shotgun sequence (340527 bp)
Overview 1 RT 1: 199465-204847 bp Neighborhood of RT #1 [199465, 204882] List_Bact_rpt RVT-Retrons tRNA_anti_2 Feature: gene Location: 199465-202317 bp Feature: domain Description: List_Bact_rpt Location: 201895-202009 bp Feature: domain Description: List_Bact_rpt Location: 201 895-202009 bp Feature: gene Location: 202324-202626 bp Feature: gene Location: 202886-203869 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 203054-203609 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 203054-203609 bp Feature: gene Location: 203904-204203 bp Feature: gene Location: 204304-204882 bp Feature: domain Description: tRNA_anti_2 Location: 204601-204847 bp Feature: domain Description: tRNA_anti_2 Location: 204601 -204847 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT List_Bact_rpt (TIGR02543), RVT-Retrons, tRNA_anti_2 (pfam13742)

Seq: MEHA01000035.1 Eisenbergiella tayi strain NML150140-1 BEI59_contig000035, whole genome shotgun sequence (85021 bp)
Overview 1 RT 1: 66192-71248 bp Neighborhood of RT #1 [66192, 71248] PRK10219 AraC_E_bind AmpC RVT-Retrons Feature: gene Location: 66192-67067 bp Feature: domain Description: PRK10219 Location: 66213-66507 bp Feature: domain Description: PRK102 19 Location: 662 13-66507 bp Feature: domain Description: AraC_E_bind Location: 66576-67059 bp Feature: domain Description: AraC_E_bind Location: 66576-67059 bp Feature: gene Location: 67149-68120 bp Feature: domain Description: AmpC Location: 67218-68052 bp Feature: domain Description: AmpC Location: 672 18-68052 bp Feature: gene Location: 68813-69832 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 68963-69521 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 68963-6952 1 bp Feature: gene Location: 69994-70911 bp Feature: gene Location: 71019-71248 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10219 (superoxide response transcriptional regulator SoxS), AraC_E_bind (smart00871), AmpC (COG1680), RVT-Retrons

Seq: MEHA01000001.1 Eisenbergiella tayi strain NML150140-1 BEI59_contig000001, whole genome shotgun sequence (629833 bp)
Overview 1 RT 1: 470654-474625 bp Neighborhood of RT #1 [470654, 474720] Avd_like RVT-DGRs PRK13387 Feature: gene Location: 470654-471706 bp Feature: gene Location: 471888-472235 bp Feature: domain Description: Avd_like Location: 471891-472194 bp Feature: domain Description: Avd_like Location: 471891-472194 bp Feature: gene Location: 472704-473891 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 472884-473607 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 472884-473 607 bp Feature: gene Location: 473869-474318 bp Feature: gene Location: 474337-474720 bp Feature: domain Description: PRK13387 Location: 474343-474625 bp Feature: domain Description: PRK13 3 87 Location: 4743 43 -474625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, PRK13387 (1,4-dihydroxy-2-naphthoate octaprenyltransferase; Provisional)

Seq: MEHA01000011.1 Eisenbergiella tayi strain NML150140-1 BEI59_contig000011, whole genome shotgun sequence (204908 bp)
Overview 1 RT 1: 157780-162165 bp Neighborhood of RT #1 [157780, 162167] FlgJ Phage_holin_4_1 RVT-DGRs Avd_like PHA00653 Feature: gene Location: 157780-158724 bp Feature: domain Description: FlgJ Location: 157798-158269 bp Feature: domain Description: FlgJ Location: 157798-158269 bp Feature: gene Location: 158728-159156 bp Feature: domain Description: Phage_holin_4_1 Location: 158782-159109 bp Feature: domain Description: Phage_holin_4 _1 Location: 158782-159109 bp Feature: gene Location: 159228-160268 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 159435-160110 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1594 35-160110 bp Feature: gene Location: 160624-161013 bp Feature: domain Description: Avd_like Location: 160684-160987 bp Feature: domain Description: Avd_like Location: 160684 -160987 bp Feature: gene Location: 161073-162167 bp Feature: domain Description: PHA00653 Location: 161166-162165 bp Feature: domain Description: PHA00653 Location: 161166-162165 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FlgJ (COG1705), Phage_holin_4_1 (pfam05105), RVT-DGRs, Avd_like (cd16376), PHA00653 (mtd;major tropism determinant)

Seq: MEHA01000047.1 Eisenbergiella tayi strain NML150140-1 BEI59_contig000047, whole genome shotgun sequence (56797 bp)
Overview 1 RT 1: 6293-12472 bp Neighborhood of RT #1 [6293, 12489] N6_N4_Mtase RVT-GII HNHc DUF4315 Feature: gene Location: 6293-7240 bp Feature: domain Description: N6_N4_Mtase Location: 6362-7217 bp Feature: domain Description: N6_N4_Mtase Location: 6362-7217 bp Feature: gene Location: 7240-9120 bp Feature: gene Location: 9845-11803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10181-10925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10181-10925 bp Feature: domain Description: HNHc Note: nucleases Location: 11504-11645 bp Feature: domain Description: HNHc Note: nucleases Location: 115 04-11645 bp Feature: gene Location: 11915-12142 bp Feature: gene Location: 12244-12489 bp Feature: domain Description: DUF4315 Location: 12256-12472 bp Feature: domain Description: DUF4315 Location: 1225 6-12472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_N4_Mtase (pfam01555), RVT-GII, HNHc (smart00507)

Seq: MEHA01000077.1 Eisenbergiella tayi strain NML150140-1 BEI59_contig000077, whole genome shotgun sequence (2438 bp)
Overview 1 RT 1: 120-1578 bp Neighborhood of RT #1 [120, 1910] RVT-GII Intron_maturas2 Feature: gene Location: 120-1910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 387-1200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 387-1200 bp Feature: domain Description: Intron_maturas2 Location: 1284-1578 bp Feature: domain Description: Intron_maturas2 Location: 1284-1578 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)