myRT

myRT report for GCA_001723675.1_ASM172367v1

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Seq: MCBV01000010.1 Candidatus Marithrix sp. Canyon 246 clone 1 NODE_12_length_95376_cov_219.685_ID_1353, whole genome shotgun sequence (95376 bp)
Overview 1 RT 1: 69936-73954 bp Neighborhood of RT #1 [69936, 74025] MutS_I RVT-DGRs Polbeta Couple_hipA HipA_C Feature: gene Location: 69936-70079 bp Feature: gene Location: 70276-70593 bp Feature: domain Description: MutS_I Location: 70300-70561 bp Feature: domain Description: MutS_I Location: 70300-70561 bp Feature: gene Location: 71023-71919 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 71131-71713 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 71 1 31 -71 71 3 bp Feature: gene Location: 72162-72443 bp Feature: domain Description: Polbeta Location: 72192-72438 bp Feature: domain Description: Polbeta Location: 721 92-72438 bp Feature: gene Location: 72844-74025 bp Feature: domain Description: Couple_hipA Location: 72877-73168 bp Feature: domain Description: Couple_hipA Location: 72877-731 68 bp Feature: domain Description: HipA_C Location: 73294-73954 bp Feature: domain Description: HipA_C Location: 73294-73954 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MutS_I (pfam01624), RVT-DGRs, Polbeta (pfam18765), Couple_hipA (pfam13657), HipA_C (pfam07804)

Seq: MCBV01000012.1 Candidatus Marithrix sp. Canyon 246 clone 1 NODE_14_length_94078_cov_179.37_ID_49, whole genome shotgun sequence (94078 bp)
Overview 1 RT 1: 13196-17604 bp Neighborhood of RT #1 [13196, 17621] MFS_1_like GEWL RVT-GII GIIM HNH RVT_N RVT-GII GEWL MORN MORN MORN MORN Feature: gene Location: 13196-14323 bp Feature: domain Description: MFS_1_like Location: 13214-14258 bp Feature: domain Description: MFS_1_like Location: 132 14-142 58 bp Feature: gene Location: 14335-14745 bp Feature: domain Description: GEWL Location: 14503-14734 bp Feature: domain Description: GEWL Location: 14503-14734 bp Feature: gene Location: 14742-15530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14745-14880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14745-14880 bp Feature: domain Description: GIIM Note: maturase Location: 14985-15135 bp Feature: domain Description: GIIM Note: maturase Location: 14985-15135 bp Feature: domain Description: HNH Note: nucleases Location: 15345-15480 bp Feature: domain Description: HNH Note: nucleases Location: 15345-15480 bp Feature: gene Location: 15544-16056 bp Feature: domain Description: RVT_N Location: 15631-15856 bp Feature: domain Description: RVT_N Location: 15631-15856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15865-16027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15865-1602 7 bp Feature: gene Location: 16640-17029 bp Feature: domain Description: GEWL Location: 16775-16931 bp Feature: domain Description: GEWL Location: 16775-16931 bp Feature: gene Location: 17043-17621 bp Feature: domain Description: MORN Location: 17262-17319 bp Feature: domain Description: MORN Location: 172 62 -17319 bp Feature: domain Description: MORN Location: 17328-17355 bp Feature: domain Description: MORN Location: 1732 8-17355 bp Feature: domain Description: MORN Location: 17469-17535 bp Feature: domain Description: MORN Location: 17469-17535 bp Feature: domain Description: MORN Location: 17538-17604 bp Feature: domain Description: MORN Location: 17538-17604 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_1_like (pfam12832), GEWL (cd01021), RVT-GII, GIIM (pfam08388), HNH (pfam01844), RVT_N (pfam13655), MORN (smart00698)

Seq: MCBV01000014.1 Candidatus Marithrix sp. Canyon 246 clone 1 NODE_16_length_76784_cov_188.092_ID_1121, whole genome shotgun sequence (76784 bp)
Overview 1 RT 1: 9975-14832 bp 2 RT 2: 21756-25576 bp Neighborhood of RT #1 [9975, 14846] rluD OM_YfiO RVT_N RVT-GII GIIM McrA PRK14342 Neighborhood of RT #2 [21756, 25587] RVT_N RVT-GII RVT_N DUF1566 Feature: gene Location: 9975-10895 bp Feature: domain Description: rluD Location: 9987-10890 bp Feature: domain Description: rluD Location: 9987-10890 bp Feature: gene Location: 10920-11699 bp Feature: domain Description: OM_YfiO Location: 10938-11658 bp Feature: domain Description: OM_YfiO Location: 1093 8-11658 bp Feature: gene Location: 11945-13816 bp Feature: domain Description: RVT_N Location: 12098-12359 bp Feature: domain Description: RVT_N Location: 12098-123 59 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12422-13070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12422-13 070 bp Feature: domain Description: GIIM Note: maturase Location: 13172-13403 bp Feature: domain Description: GIIM Note: maturase Location: 13 172-13 403 bp Feature: domain Description: McrA Location: 13550-13757 bp Feature: domain Description: McrA Location: 13 550-13 757 bp Feature: gene Location: 14050-14184 bp Feature: gene Location: 14361-14846 bp Feature: domain Description: PRK14342 Location: 14373-14832 bp Feature: domain Description: PRK143 42 Location: 143 73 -1483 2 bp Feature: gene Location: 21756-22145 bp Feature: gene Location: 22137-22298 bp Feature: gene Location: 22872-23300 bp Feature: domain Description: RVT_N Location: 22878-22968 bp Feature: domain Description: RVT_N Location: 22878-22968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23016-23289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 016-23 289 bp Feature: gene Location: 23317-23502 bp Feature: domain Description: RVT_N Location: 23374-23494 bp Feature: domain Description: RVT_N Location: 23 3 74-23 494 bp Feature: gene Location: 24088-25587 bp Feature: domain Description: DUF1566 Location: 25183-25576 bp Feature: domain Description: DUF1566 Location: 25183 -25576 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rluD (PRK11180), OM_YfiO (TIGR03302), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), PRK14342 (lipoyl(octanoyl) transferase LipB), DUF1566 (pfam07603)

Seq: MCBV01000019.1 Candidatus Marithrix sp. Canyon 246 clone 1 NODE_21_length_57707_cov_189.35_ID_1139, whole genome shotgun sequence (57707 bp)
Overview 1 RT 1: 25992-30846 bp Neighborhood of RT #1 [25992, 30854] DUF3108 NlpB RVT_N RVT-GII GIIM HNH PRK03170 Feature: gene Location: 25992-26696 bp Feature: domain Description: DUF3108 Location: 26058-26676 bp Feature: domain Description: DUF3108 Location: 26058-26676 bp Feature: gene Location: 26738-27334 bp Feature: domain Description: NlpB Location: 26744-27311 bp Feature: domain Description: NlpB Location: 2674 4 -27311 bp Feature: gene Location: 27509-29299 bp Feature: domain Description: RVT_N Location: 27596-27842 bp Feature: domain Description: RVT_N Location: 27596-2784 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27905-28553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27905-28553 bp Feature: domain Description: GIIM Note: maturase Location: 28658-28886 bp Feature: domain Description: GIIM Note: maturase Location: 28658-28886 bp Feature: domain Description: HNH Note: nucleases Location: 29114-29249 bp Feature: domain Description: HNH Note: nucleases Location: 29114 -2924 9 bp Feature: gene Location: 29639-29767 bp Feature: gene Location: 29979-30854 bp Feature: domain Description: PRK03170 Location: 29982-30846 bp Feature: domain Description: PRK03170 Location: 29982-3084 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3108 (pfam11306), NlpB (COG3317), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PRK03170 (dihydrodipicolinate synthase; Provisional)

Seq: MCBV01000002.1 Candidatus Marithrix sp. Canyon 246 clone 1 NODE_2_length_207251_cov_232.41_ID_1253, whole genome shotgun sequence (207251 bp)
Overview 1 RT 1: 51851-56940 bp Neighborhood of RT #1 [51851, 56945] RVT_N RVT-GII YkfC HNH PdxJ PRK05749 Feature: gene Location: 51851-52135 bp Feature: gene Location: 52501-52698 bp Feature: gene Location: 52705-54495 bp Feature: domain Description: RVT_N Location: 52792-53038 bp Feature: domain Description: RVT_N Location: 5 2792-5 3038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53101-53749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 3101-5 3749 bp Feature: domain Description: YkfC Location: 53818-54106 bp Feature: domain Description: YkfC Location: 5 3818-5 4106 bp Feature: domain Description: HNH Note: nucleases Location: 54310-54445 bp Feature: domain Description: HNH Note: nucleases Location: 5 4310-5 4445 bp Feature: gene Location: 55013-55732 bp Feature: domain Description: PdxJ Location: 55031-55724 bp Feature: domain Description: PdxJ Location: 5 5 031-5 5 724 bp Feature: gene Location: 55725-56945 bp Feature: domain Description: PRK05749 Location: 55728-56940 bp Feature: domain Description: PRK05 749 Location: 5 5 728-5 6940 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), PdxJ (pfam03740), PRK05749 (3-deoxy-D-manno-octulosonic-acid transferase; Reviewed)

Seq: MCBV01000030.1 Candidatus Marithrix sp. Canyon 246 clone 1 NODE_35_length_20406_cov_199.761_ID_93, whole genome shotgun sequence (20406 bp)
Overview 1 RT 1: 7134-14606 bp Neighborhood of RT #1 [7134, 14659] COG4637 PRK07209 RVT_N RVT-GII YkfC HNH_5 PRK07209 PRK07207 Feature: gene Location: 7134-8240 bp Feature: domain Description: COG4637 Location: 7158-8175 bp Feature: domain Description: COG46 37 Location: 7158-8175 bp Feature: gene Location: 8302-9159 bp Feature: domain Description: PRK07209 Location: 8455-9157 bp Feature: domain Description: PRK07209 Location: 8455-9157 bp Feature: gene Location: 9116-10873 bp Feature: domain Description: RVT_N Location: 9176-9419 bp Feature: domain Description: RVT_N Location: 9176 -9419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9470-10142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9470-10142 bp Feature: domain Description: YkfC Location: 10154-10538 bp Feature: domain Description: YkfC Location: 10154-10538 bp Feature: domain Description: HNH_5 Location: 10655-10790 bp Feature: domain Description: HNH_5 Location: 106 55-10790 bp Feature: gene Location: 11492-11929 bp Feature: domain Description: PRK07209 Location: 11498-11927 bp Feature: domain Description: PRK07209 Location: 11498-11927 bp Feature: gene Location: 11960-14659 bp Feature: domain Description: PRK07207 Location: 11969-14606 bp Feature: domain Description: PRK07207 Location: 1196 9-146 06 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4637 (Predicted ATPase ), PRK07209 (ribonucleotide-diphosphate reductase subunit beta; Validated), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH_5 (pfam14279), PRK07207 (ribonucleoside-diphosphate reductase subunit alpha)

Seq: MCBV01000004.1 Candidatus Marithrix sp. Canyon 246 clone 1 NODE_6_length_136816_cov_195.556_ID_71, whole genome shotgun sequence (136825 bp)
Overview 1 RT 1: 47734-53447 bp Neighborhood of RT #1 [47734, 53500] argS hemeryth_dom RVT_N RVT-GII GIIM Hemerythrin M48C_Oma1_like Feature: gene Location: 47734-49440 bp Feature: domain Description: argS Location: 47740-49438 bp Feature: domain Description: argS Location: 47 7 40-49438 bp Feature: gene Location: 49703-49894 bp Feature: domain Description: hemeryth_dom Location: 49718-49826 bp Feature: domain Description: hemeryth_dom Location: 497 18-49826 bp Feature: gene Location: 50437-51876 bp Feature: domain Description: RVT_N Location: 50506-50686 bp Feature: domain Description: RVT_N Location: 50506-50686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50782-51394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 507 82-51394 bp Feature: domain Description: GIIM Note: maturase Location: 51499-51727 bp Feature: domain Description: GIIM Note: maturase Location: 51499-517 27 bp Feature: gene Location: 52004-52303 bp Feature: domain Description: Hemerythrin Location: 52010-52202 bp Feature: domain Description: Hemerythrin Location: 52010-52202 bp Feature: gene Location: 52727-53500 bp Feature: domain Description: M48C_Oma1_like Location: 52922-53447 bp Feature: domain Description: M48C_Oma1_like Location: 52922-53447 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT argS (TIGR00456), hemeryth_dom (TIGR02481), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Hemerythrin (TIGR00058), M48C_Oma1_like (cd07342)