myRT

myRT report for GCA_001724025.1_ASM172402v1

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Seq: MEDJ01000012.1 Acidobacteria bacterium SCN 69-37 ABS36_C0012, whole genome shotgun sequence (70377 bp)
Overview 1 RT 1: 68241-70272 bp Neighborhood of RT #1 [68241, 70377] HTH_XRE RVT-Retrons HTH_XRE Feature: gene Location: 68241-68447 bp Feature: gene Location: 68509-68841 bp Feature: domain Description: HTH_XRE Location: 68521-68686 bp Feature: domain Description: HTH_XRE Location: 68521 -68686 bp Feature: gene Location: 68843-69724 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 68960-69491 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 68960-69491 bp Feature: gene Location: 70158-70377 bp Feature: domain Description: HTH_XRE Location: 70170-70272 bp Feature: domain Description: HTH_XRE Location: 701 70-70272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons

Seq: MEDJ01000019.1 Acidobacteria bacterium SCN 69-37 ABS36_C0019, whole genome shotgun sequence (415853 bp)
Overview 1 RT 1: 1-6988 bp Neighborhood of RT #1 [1, 7374] IstB_IS21 RVT-Retrons Trypsin_2 DUF4145 PLDc_N_DEXD_a PRK04914 PRK04914 Feature: gene Location: 1-345 bp Feature: domain Description: IstB_IS21 Location: 10-274 bp Feature: domain Description: IstB_IS2 1 Location: 10-2 74 bp Feature: gene Location: 437-688 bp Feature: gene Location: 1640-3313 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1820-2420 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 182 0-2 42 0 bp Feature: domain Description: Trypsin_2 Location: 2798-3188 bp Feature: domain Description: Trypsin_2 Location: 2 798-3188 bp Feature: gene Location: 3314-4165 bp Feature: domain Description: DUF4145 Location: 3869-4133 bp Feature: domain Description: DUF4145 Location: 3869-4133 bp Feature: gene Location: 4168-7374 bp Feature: domain Description: PLDc_N_DEXD_a Location: 4204-4786 bp Feature: domain Description: PLDc_N_DEXD_a Location: 42 04-4786 bp Feature: domain Description: PRK04914 Location: 5050-5737 bp Feature: domain Description: PRK04914 Location: 5050-5737 bp Feature: domain Description: PRK04914 Location: 6403-6988 bp Feature: domain Description: PRK04914 Location: 6403-6988 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IstB_IS21 (pfam01695), RVT-Retrons, Trypsin_2 (pfam13365), DUF4145 (pfam13643), PLDc_N_DEXD_a (cd09179), PRK04914 (RNA polymerase-associated protein RapA)