myRT

myRT report for GCA_001726855.1_ASM172685v1

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Seq: MIRS01000038.1 Vibrio parahaemolyticus strain GCSL_R87 CFSAN011134_contig0037, whole genome shotgun sequence (544232 bp)
Overview 1 RT 1: 77458-84490 bp Neighborhood of RT #1 [77458, 84558] SMC_prok_B COG5340 RVT-UG3 RVT-UG8 PRK09726 LysR Feature: gene Location: 77458-78459 bp Ori: ODX75760.1 Feature: domain Description: SMC_prok_B Location: 77707-78442 bp Feature: domain Description: SMC_prok_B Location: 77707-78442 bp Feature: gene Location: 78506-79033 bp Ori: ODX75761.1 Feature: domain Description: COG5340 Location: 78626-78851 bp Feature: domain Description: COG5340 Location: 78626-78851 bp Feature: gene Location: 79154-80386 bp Ori: ODX75762.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 79436-79910 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 79436-7991 0 bp Feature: gene Location: 80387-82417 bp Ori: ODX75763.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 80966-81407 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 80966-81 407 bp Feature: gene Location: 82992-83246 bp Ori: ODX75764.1 Feature: domain Description: PRK09726 Location: 83001-83211 bp Feature: domain Description: PRK09726 Location: 83001 -8321 1 bp Feature: gene Location: 83605-84558 bp Ori: ODX75765.1 Feature: domain Description: LysR Location: 83617-84490 bp Feature: domain Description: LysR Location: 8361 7-84490 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SMC_prok_B (TIGR02168), COG5340 (Transcriptional regulator, predicted component of viral defense system ), RVT-UG3, RVT-UG8, PRK09726 (type II toxin-antitoxin system antitoxin HipB), LysR (COG0583)