myRT

myRT report for GCA_001726885.1_ASM172688v1

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Seq: MIRR01000081.1 Vibrio parahaemolyticus strain GCSL_R86 CFSAN011133_contig0080, whole genome shotgun sequence (192233 bp)
Overview 1 RT 1: 180156-184884 bp Neighborhood of RT #1 [180156, 184886] RVT-UG2 Mrr_cat zf-C4_Topoisom AlpA Feature: gene Location: 180156-180542 bp Feature: gene Location: 180535-181410 bp Feature: gene Location: 181929-183239 bp Ori: ODX59278.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 182130-182943 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 821 30-1 82943 bp Feature: gene Location: 183450-184265 bp Ori: ODX59279.1 Feature: domain Description: Mrr_cat Location: 183750-184080 bp Feature: domain Description: Mrr_cat Location: 1 83750-1 84080 bp Feature: domain Description: zf-C4_Topoisom Location: 184149-184257 bp Feature: domain Description: zf-C4_Topoisom Location: 1 841 49-1 84257 bp Feature: gene Location: 184722-184886 bp Ori: ODX59280.1 Feature: domain Description: AlpA Location: 184728-184884 bp Feature: domain Description: AlpA Location: 1 84728-1 84884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, Mrr_cat (pfam04471), zf-C4_Topoisom (pfam01396), AlpA (COG3311)

Seq: MIRR01000104.1 Vibrio parahaemolyticus strain GCSL_R86 CFSAN011133_contig0103, whole genome shotgun sequence (380580 bp)
Overview 1 RT 1: 367742-373960 bp Neighborhood of RT #1 [367742, 374403] LDH_like_2 PRK11020 RVT-Retrons Smc Smc Smc Feature: gene Location: 367742-368737 bp Ori: ODX56892.1 Feature: domain Description: LDH_like_2 Location: 367751-368726 bp Feature: domain Description: LDH_like_2 Location: 367751-36872 6 bp Feature: gene Location: 368821-369177 bp Ori: ODX56893.1 Feature: domain Description: PRK11020 Location: 368824-369175 bp Feature: domain Description: PRK1102 0 Location: 36882 4-369175 bp Feature: gene Location: 369837-370979 bp Ori: ODX56922.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 370059-370704 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 370059-370704 bp Feature: gene Location: 371227-372390 bp Feature: gene Location: 372514-374403 bp Ori: ODX56895.1 Feature: domain Description: Smc Location: 372583-372673 bp Feature: domain Description: Smc Location: 372 583-372 673 bp Feature: domain Description: Smc Location: 373099-373474 bp Feature: domain Description: Smc Location: 373099-373474 bp Feature: domain Description: Smc Location: 373609-373960 bp Feature: domain Description: Smc Location: 373609-373960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LDH_like_2 (cd12183), PRK11020 (YibL family ribosome-associated protein), RVT-Retrons, Smc (COG1196)