myRT

myRT report for GCA_001726895.1_ASM172689v1

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Seq: MIRT01000080.1 Vibrio parahaemolyticus strain GCSL_R88 CFSAN011135_contig0079, whole genome shotgun sequence (545160 bp)
Overview 1 RT 1: 78260-85292 bp Neighborhood of RT #1 [78260, 85360] SMC_prok_B COG5340 RVT-UG3 RVT-UG8 PRK09726 LysR Feature: gene Location: 78260-79261 bp Ori: ODX68847.1 Feature: domain Description: SMC_prok_B Location: 78509-79244 bp Feature: domain Description: SMC_prok_B Location: 78509-79244 bp Feature: gene Location: 79308-79835 bp Ori: ODX68848.1 Feature: domain Description: COG5340 Location: 79428-79653 bp Feature: domain Description: COG5340 Location: 79428-79653 bp Feature: gene Location: 79956-81188 bp Ori: ODX68849.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 80238-80712 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 80238-8071 2 bp Feature: gene Location: 81189-83219 bp Ori: ODX68850.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 81768-82209 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 81 768-82209 bp Feature: gene Location: 83794-84048 bp Ori: ODX68851.1 Feature: domain Description: PRK09726 Location: 83803-84013 bp Feature: domain Description: PRK09726 Location: 83803-8401 3 bp Feature: gene Location: 84407-85360 bp Ori: ODX68852.1 Feature: domain Description: LysR Location: 84419-85292 bp Feature: domain Description: LysR Location: 8441 9-85292 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SMC_prok_B (TIGR02168), COG5340 (Transcriptional regulator, predicted component of viral defense system ), RVT-UG3, RVT-UG8, PRK09726 (type II toxin-antitoxin system antitoxin HipB), LysR (COG0583)