myRT

myRT report for GCA_001727125.1_ASM172712v1

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Seq: MISF01000010.1 Vibrio parahaemolyticus strain GCSL_R131 CFSAN011151_contig0009, whole genome shotgun sequence (85686 bp)
Overview 1 RT 1: 1755-5277 bp Neighborhood of RT #1 [1755, 5279] GATase1_PfpI_2 DUF3792 RVT-UG7 RimI DUF3265 Feature: gene Location: 1755-2351 bp Ori: ODY34809.1 Feature: domain Description: GATase1_PfpI_2 Location: 1764-2271 bp Feature: domain Description: GATase1 _PfpI_2 Location: 1 764-2271 bp Feature: gene Location: 2558-2764 bp Ori: ODY34810.1 Feature: domain Description: DUF3792 Location: 2573-2726 bp Feature: domain Description: DUF3792 Location: 2573-2726 bp Feature: gene Location: 2912-4450 bp Ori: ODY34811.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 3284-3704 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 3284-3704 bp Feature: gene Location: 4587-5063 bp Ori: ODY34812.1 Feature: domain Description: RimI Location: 4620-5010 bp Feature: domain Description: RimI Location: 4620-501 0 bp Feature: gene Location: 5097-5279 bp Ori: ODY34813.1 Feature: domain Description: DUF3265 Location: 5196-5277 bp Feature: domain Description: DUF3265 Location: 51 96-5277 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GATase1_PfpI_2 (cd03139), DUF3792 (pfam12670), RVT-UG7, RimI (COG0456), DUF3265 (pfam11665)

Seq: MISF01000102.1 Vibrio parahaemolyticus strain GCSL_R131 CFSAN011151_contig0101, whole genome shotgun sequence (547621 bp)
Overview 1 RT 1: 532196-537886 bp Neighborhood of RT #1 [532196, 538323] RVT-UNC AAA15 Smc DUF4297 Feature: gene Location: 532196-532435 bp Feature: gene Location: 532722-533615 bp Feature: gene Location: 533617-535299 bp Ori: ODY25550.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 534019-534388 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 534019-534388 bp Feature: gene Location: 535586-537238 bp Ori: ODY25551.1 Feature: domain Description: AAA15 Location: 535625-535796 bp Feature: domain Description: AAA15 Location: 53562 5-535796 bp Feature: domain Description: Smc Location: 536177-536786 bp Feature: domain Description: Smc Location: 536177-536786 bp Feature: gene Location: 537235-538323 bp Ori: ODY25552.1 Feature: domain Description: DUF4297 Location: 537274-537886 bp Feature: domain Description: DUF42 97 Location: 5372 74-537886 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs/RVT-UG17/RVT-UG3/RVT-UG25(RVT-UNC), AAA15 (COG1106), Smc (COG1196), DUF4297 (pfam14130)