myRT

myRT report for GCA_001728655.1_ASM172865v1

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Seq: MIVD01000097.1 Vibrio parahaemolyticus strain CDC_K5618 CFSAN011232_contig0096, whole genome shotgun sequence (200027 bp)
Overview 1 RT 1: 96838-104123 bp Neighborhood of RT #1 [96838, 104188] SmpB PRK09692 RVT-UG3 RVT-UG8 AlpA Feature: gene Location: 96838-97323 bp Ori: OEB65448.1 Feature: domain Description: SmpB Location: 96868-97315 bp Feature: domain Description: SmpB Location: 96868-9731 5 bp Feature: gene Location: 97945-99168 bp Ori: OEB65449.1 Feature: domain Description: PRK09692 Location: 97948-99142 bp Feature: domain Description: PRK09692 Location: 97948-991 42 bp Feature: gene Location: 99559-100821 bp Ori: OEB65450.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 99850-100333 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 99850-1 00333 bp Feature: gene Location: 100822-102771 bp Ori: OEB65451.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 101296-101743 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 01 296-1 01 743 bp Feature: gene Location: 103107-103952 bp Feature: gene Location: 103949-104188 bp Ori: OEB65534.1 Feature: domain Description: AlpA Location: 103955-104123 bp Feature: domain Description: AlpA Location: 1 03955-1 041 23 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SmpB (pfam01668), PRK09692 (Integrase; provisional), RVT-UG3, RVT-UG8, AlpA (COG3311)