myRT

myRT report for GCA_001728665.1_ASM172866v1

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Seq: MIVE01000031.1 Vibrio parahaemolyticus strain CDC_K5620 CFSAN011233_contig0030, whole genome shotgun sequence (200018 bp)
Overview 1 RT 1: 96829-104114 bp Neighborhood of RT #1 [96829, 104179] SmpB PRK09692 RVT-UG3 RVT-UG8 AlpA Feature: gene Location: 96829-97314 bp Ori: OEB81110.1 Feature: domain Description: SmpB Location: 96859-97306 bp Feature: domain Description: SmpB Location: 96859-97306 bp Feature: gene Location: 97936-99159 bp Ori: OEB81111.1 Feature: domain Description: PRK09692 Location: 97939-99133 bp Feature: domain Description: PRK09692 Location: 97939-991 33 bp Feature: gene Location: 99550-100812 bp Ori: OEB81112.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 99841-100324 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 99841 -1 00324 bp Feature: gene Location: 100813-102762 bp Ori: OEB81113.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 101287-101734 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 01 287-1 01 734 bp Feature: gene Location: 103098-103943 bp Feature: gene Location: 103940-104179 bp Ori: OEB81196.1 Feature: domain Description: AlpA Location: 103946-104114 bp Feature: domain Description: AlpA Location: 1 03946-1 041 1 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SmpB (pfam01668), PRK09692 (Integrase; provisional), RVT-UG3, RVT-UG8, AlpA (COG3311)