myRT

myRT report for GCA_001728755.1_ASM172875v1

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Seq: MIVI01000004.1 Vibrio parahaemolyticus strain CDC_K5701 CFSAN011238_contig0003, whole genome shotgun sequence (215075 bp)
Overview 1 RT 1: 196376-214838 bp Neighborhood of RT #1 [196376, 214921] AAA_21 RVT-Retrons DUF2384 RVT-UG1 HsdR Feature: gene Location: 196376-197959 bp Feature: gene Location: 198072-200180 bp Ori: OEB93017.1 Feature: domain Description: AAA_21 Location: 198147-199095 bp Feature: domain Description: AAA_21 Location: 1 981 47-1 99095 bp Feature: gene Location: 200367-201416 bp Ori: OEB93018.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 200502-201042 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 200502-201 042 bp Feature: gene Location: 201472-203181 bp Feature: gene Location: 203238-204418 bp Feature: gene Location: 205156-205395 bp Ori: OEB93020.1 Feature: domain Description: DUF2384 Location: 205243-205384 bp Feature: domain Description: DUF2384 Location: 205243-205384 bp Feature: gene Location: 205673-207580 bp Feature: gene Location: 208034-211903 bp Ori: OEB93022.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 208721-209249 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 208721 -209249 bp Feature: gene Location: 211973-214921 bp Feature: domain Description: HsdR Location: 212009-214838 bp Feature: domain Description: HsdR Location: 21 2009-21 4838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), RVT-Retrons, DUF2384 (pfam09722), RVT-UG1, HsdR (COG4096)