myRT

myRT report for GCA_001729985.1_AB1_endozoicomonas

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Seq: MDLD01000129.1 Endozoicomonas sp. (ex Bugula neritina AB1) isolate AB1-5 ACH42_contig000129, whole genome shotgun sequence (10153 bp)
Overview 1 RT 1: 6477-9862 bp Neighborhood of RT #1 [6477, 10098] L-AlaDH RVT-Retrons Feature: gene Location: 6477-7279 bp Feature: gene Location: 8058-9179 bp Feature: domain Description: L-AlaDH Location: 8061-9132 bp Feature: domain Description: L-AlaDH Location: 8061 -91 32 bp Feature: gene Location: 9598-10098 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9616-9862 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 961 6-9862 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L-AlaDH (cd05305), RVT-Retrons

Seq: MDLD01000258.1 Endozoicomonas sp. (ex Bugula neritina AB1) isolate AB1-5 ACH42_contig000258, whole genome shotgun sequence (41201 bp)
Overview 1 RT 1: 12025-16814 bp Neighborhood of RT #1 [12025, 17026] SmrA RVT-GII GIIM YqxC STKc_PknB_like Feature: gene Location: 12025-12591 bp Feature: gene Location: 13247-13798 bp Feature: domain Description: SmrA Location: 13256-13793 bp Feature: domain Description: SmrA Location: 132 56-13793 bp Feature: gene Location: 14172-15131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14178-14739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14178-14739 bp Feature: domain Description: GIIM Note: maturase Location: 14823-15036 bp Feature: domain Description: GIIM Note: maturase Location: 1482 3-15036 bp Feature: gene Location: 15334-16098 bp Feature: domain Description: YqxC Location: 15340-16093 bp Feature: domain Description: YqxC Location: 15340-16093 bp Feature: gene Location: 16130-17026 bp Feature: domain Description: STKc_PknB_like Location: 16325-16814 bp Feature: domain Description: STKc_PknB_like Location: 1632 5-16814 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SmrA (COG2840), RVT-GII, GIIM (pfam08388), YqxC (COG1189), STKc_PknB_like (cd14014)

Seq: MDLD01000212.1 Endozoicomonas sp. (ex Bugula neritina AB1) isolate AB1-5 ACH42_contig000212, whole genome shotgun sequence (20489 bp)
Overview 1 RT 1: 6422-11973 bp Neighborhood of RT #1 [6422, 11973] COG3791 RVT-GII GIIM COG3981 Feature: gene Location: 6422-6829 bp Feature: domain Description: COG3791 Location: 6440-6812 bp Feature: domain Description: COG3 791 Location: 6440-6812 bp Feature: gene Location: 6863-7117 bp Feature: gene Location: 7104-8478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7398-8016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73 98-8016 bp Feature: domain Description: GIIM Note: maturase Location: 8064-8178 bp Feature: domain Description: GIIM Note: maturase Location: 8064-8178 bp Feature: gene Location: 8595-9113 bp Feature: domain Description: COG3981 Location: 8598-9102 bp Feature: domain Description: COG3 981 Location: 8598-9102 bp Feature: gene Location: 10234-11973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3791 (Uncharacterized conserved protein ), RVT-GII, GIIM (pfam08388), COG3981 (Predicted acetyltransferase )