myRT

myRT report for GCA_001730225.1_ASM173022v1

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Seq: MIJE01000011.1 Desulfuribacillus alkaliarsenatis strain AHT28 DSM-24608_Contig_1_85X, whole genome shotgun sequence (318774 bp)
Overview 1 RT 1: 312981-318278 bp Neighborhood of RT #1 [312981, 318346] AbiGii_2 NB-ARC RVT-GII GIIM Feature: gene Location: 312981-314204 bp Ori: OEF97556.1 Feature: domain Description: AbiGii_2 Location: 312993-314157 bp Feature: domain Description: AbiGii_2 Location: 31 2993-31 41 57 bp Feature: gene Location: 314467-316443 bp Ori: OEF97557.1 Feature: domain Description: NB-ARC Location: 314824-315454 bp Feature: domain Description: NB-ARC Location: 31 4824-31 5454 bp Feature: gene Location: 317057-318346 bp Ori: OEF97558.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 317357-317984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 7357-31 7984 bp Feature: domain Description: GIIM Note: maturase Location: 318056-318278 bp Feature: domain Description: GIIM Note: maturase Location: 31 8056-31 8278 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiGii_2 (pfam16873), NB-ARC (pfam00931), RVT-GII, GIIM (pfam08388)

Seq: MIJE01000033.1 Desulfuribacillus alkaliarsenatis strain AHT28 DSM-24608_Contig_6_85X, whole genome shotgun sequence (196096 bp)
Overview 1 RT 1: 1461-6176 bp Neighborhood of RT #1 [1461, 6176] RVT-GII GIIM DUF4263 Feature: gene Location: 1461-2090 bp Feature: gene Location: 2568-2765 bp Feature: gene Location: 2753-4099 bp Ori: OEF95971.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3059-3728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3059-372 8 bp Feature: domain Description: GIIM Note: maturase Location: 3806-4010 bp Feature: domain Description: GIIM Note: maturase Location: 3806-4010 bp Feature: gene Location: 4241-5038 bp Ori: OEF95972.1 Feature: domain Description: DUF4263 Location: 4505-5000 bp Feature: domain Description: DUF42 63 Location: 4505-5000 bp Feature: gene Location: 5787-6176 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF4263 (pfam14082)

Seq: MIJE01000001.1 Desulfuribacillus alkaliarsenatis strain AHT28 DSM-24608_Contig_0_85X, whole genome shotgun sequence (689966 bp)
Overview 1 RT 1: 185384-190673 bp Neighborhood of RT #1 [185384, 190675] RusA pP_pnuc_2 RVT-UG12 YdhG Feature: gene Location: 185384-185815 bp Ori: OEF98275.1 Feature: domain Description: RusA Location: 185432-185693 bp Feature: domain Description: RusA Location: 18543 2-185693 bp Feature: gene Location: 185817-186449 bp Ori: OEF98276.1 Feature: domain Description: pP_pnuc_2 Location: 186114-186444 bp Feature: domain Description: pP_pnuc_2 Location: 186114-186444 bp Feature: gene Location: 187024-189087 bp Ori: OEF98277.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 187372-187825 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 1873 72-187825 bp Feature: gene Location: 189314-189853 bp Feature: gene Location: 190307-190675 bp Ori: OEF98278.1 Feature: domain Description: YdhG Location: 190316-190673 bp Feature: domain Description: YdhG Location: 1903 16-190673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RusA (pfam05866), pP_pnuc_2 (pfam18166), RVT-UG12, YdhG (COG5646)