myRT

myRT report for GCA_001735875.1_ASM173587v1

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Seq: DS021220.1 Olavius algarvensis Delta 1 endosymbiont Gutless_Worm_Scaffold4 genomic scaffold, whole genome shotgun sequence (407380 bp)
Overview 1 RT 1: 129947-134151 bp Neighborhood of RT #1 [129947, 134151] RVT-GII GIIM DksA Feature: gene Location: 129947-130456 bp Feature: gene Location: 130407-130658 bp Feature: gene Location: 130978-131988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131035-131653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 035-1 31 653 bp Feature: domain Description: GIIM Note: maturase Location: 131701-131917 bp Feature: domain Description: GIIM Note: maturase Location: 1 31 701 -1 31 91 7 bp Feature: gene Location: 133336-133704 bp Feature: domain Description: DksA Location: 133339-133693 bp Feature: domain Description: DksA Location: 1 33339-1 33693 bp Feature: gene Location: 133975-134151 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DksA (COG1734)

Seq: DS021222.1 Olavius algarvensis Delta 1 endosymbiont Gutless_Worm_Scaffold6 genomic scaffold, whole genome shotgun sequence (312075 bp)
Overview 1 RT 1: 12814-14286 bp 2 RT 2: 111152-115492 bp Neighborhood of RT #1 [12814, 14357] RVT-GII Neighborhood of RT #2 [111152, 115492] PBP2_TRAP_Siap_TeaA_like DctQ RVT-GII GIIM RVT-GII Feature: gene Location: 12814-13119 bp Feature: gene Location: 13070-13321 bp Feature: gene Location: 13572-14357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13668-14286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13668-142 86 bp Feature: gene Location: 111152-111805 bp Feature: domain Description: PBP2_TRAP_Siap_TeaA_like Location: 111158-111788 bp Feature: domain Description: PBP2 _TRAP_Siap_TeaA_like Location: 111158-111788 bp Feature: gene Location: 111721-113055 bp Feature: domain Description: DctQ Location: 111865-112963 bp Feature: domain Description: DctQ Location: 111865-112 963 bp Feature: gene Location: 113871-114305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113877-113970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113877-113970 bp Feature: domain Description: GIIM Note: maturase Location: 114018-114234 bp Feature: domain Description: GIIM Note: maturase Location: 114018-1142 34 bp Feature: gene Location: 114263-114865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114359-114794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114359-114794 bp Feature: gene Location: 114870-115004 bp Feature: gene Location: 115241-115492 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PBP2_TRAP_Siap_TeaA_like (cd13603), DctQ (pfam04290), GIIM (pfam08388)

Seq: DS021227.1 Olavius algarvensis Delta 1 endosymbiont Gutless_Worm_Scaffold8 genomic scaffold, whole genome shotgun sequence (265094 bp)
Overview 1 RT 1: 818-3635 bp Neighborhood of RT #1 [818, 3670] RVT-CRISPR-like GIIM YdjM Feature: gene Location: 818-1159 bp Feature: gene Location: 1158-1409 bp Feature: gene Location: 1644-2564 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2109-2229 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2109-2229 bp Feature: domain Description: GIIM Note: maturase Location: 2277-2493 bp Feature: domain Description: GIIM Note: maturase Location: 2277-2493 bp Feature: gene Location: 2883-3080 bp Feature: gene Location: 3110-3670 bp Feature: domain Description: YdjM Location: 3113-3635 bp Feature: domain Description: YdjM Location: 3 113 -3 63 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, GIIM (pfam08388), YdjM (pfam04307)

Seq: DS021233.1 Olavius algarvensis Delta 1 endosymbiont Gutless_Worm_Scaffold20 genomic scaffold, whole genome shotgun sequence (228156 bp)
Overview 1 RT 1: 196208-200399 bp Neighborhood of RT #1 [196208, 200515] RVT-GII GIIM S-methyl_trans PreA Fer4 Feature: gene Location: 196208-196480 bp Feature: gene Location: 196479-196730 bp Feature: gene Location: 196992-197618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 196995-197283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 196995-197283 bp Feature: domain Description: GIIM Note: maturase Location: 197331-197547 bp Feature: domain Description: GIIM Note: maturase Location: 197331-19754 7 bp Feature: gene Location: 198181-199092 bp Feature: domain Description: S-methyl_trans Location: 198217-199075 bp Feature: domain Description: S-methyl_trans Location: 198217-199075 bp Feature: gene Location: 199382-200515 bp Feature: domain Description: PreA Location: 200153-200291 bp Feature: domain Description: PreA Location: 200153-200291 bp Feature: domain Description: Fer4 Location: 200333-200399 bp Feature: domain Description: Fer4 Location: 200333-200399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), S-methyl_trans (pfam02574), PreA (COG1146), Fer4 (pfam00037)

Seq: DS021236.1 Olavius algarvensis Delta 1 endosymbiont Gutless_Worm_Scaffold22 genomic scaffold, whole genome shotgun sequence (208907 bp)
Overview 1 RT 1: 100983-103758 bp Neighborhood of RT #1 [100983, 103758] UbiE RVT-GII GIIM Feature: gene Location: 100983-101147 bp Feature: domain Description: UbiE Location: 100998-101139 bp Feature: domain Description: UbiE Location: 100998-101139 bp Feature: gene Location: 101380-101667 bp Feature: gene Location: 101978-102799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102248-102782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102248-102782 bp Feature: gene Location: 102931-103284 bp Feature: domain Description: GIIM Note: maturase Location: 102937-103132 bp Feature: domain Description: GIIM Note: maturase Location: 102937-103132 bp Feature: gene Location: 103393-103758 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UbiE (COG2226), RVT-GII, GIIM (pfam08388)

Seq: DS021242.1 Olavius algarvensis Delta 1 endosymbiont Gutless_Worm_Scaffold33 genomic scaffold, whole genome shotgun sequence (161773 bp)
Overview 1 RT 1: 13192-18707 bp Neighborhood of RT #1 [13192, 18784] RVT-UG4 RVT-UG4 COG2865 PRK15429 Feature: gene Location: 13192-14739 bp Feature: gene Location: 14269-14442 bp Feature: gene Location: 14992-15489 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 14995-15145 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 14995-15145 bp Feature: gene Location: 15602-16273 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 15989-16259 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 15989-16 259 bp Feature: gene Location: 16709-18118 bp Feature: domain Description: COG2865 Location: 16760-18071 bp Feature: domain Description: COG286 5 Location: 16 76 0-18071 bp Feature: gene Location: 18335-18784 bp Feature: domain Description: PRK15429 Location: 18341-18707 bp Feature: domain Description: PRK15429 Location: 18341-18707 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, COG2865 (Predicted transcriptional regulator, contains HTH domain ), PRK15429 (formate hydrogenlyase transcriptional activator FlhA)

Seq: DS021244.1 Olavius algarvensis Delta 1 endosymbiont Gutless_Worm_Scaffold35 genomic scaffold, whole genome shotgun sequence (148360 bp)
Overview 1 RT 1: 29944-33465 bp 2 RT 2: 54937-60002 bp Neighborhood of RT #1 [29944, 33465] YjgA-like RlmL RVT-GII GIIM Neighborhood of RT #2 [54937, 60007] RVT-GII GIIM DDE_Tnp_IS66 DUF4338 Feature: gene Location: 29944-30426 bp Feature: domain Description: YjgA-like Location: 30169-30415 bp Feature: domain Description: YjgA-like Location: 30169-30415 bp Feature: gene Location: 30496-31689 bp Feature: domain Description: RlmL Location: 30574-31684 bp Feature: domain Description: RlmL Location: 3057 4-31684 bp Feature: gene Location: 32098-32532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32104-32197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32104-32197 bp Feature: domain Description: GIIM Note: maturase Location: 32245-32461 bp Feature: domain Description: GIIM Note: maturase Location: 32245-32461 bp Feature: gene Location: 32922-33173 bp Feature: gene Location: 33124-33465 bp Feature: gene Location: 54937-55179 bp Feature: gene Location: 55413-55568 bp Feature: gene Location: 56682-57116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56688-56781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56688-567 81 bp Feature: domain Description: GIIM Note: maturase Location: 56829-57045 bp Feature: domain Description: GIIM Note: maturase Location: 56829-57 045 bp Feature: gene Location: 57447-59153 bp Feature: domain Description: DDE_Tnp_IS66 Location: 58035-58911 bp Feature: domain Description: DDE_Tnp_IS66 Location: 58035-58911 bp Feature: gene Location: 59150-60007 bp Feature: domain Description: DUF4338 Location: 59333-60002 bp Feature: domain Description: DUF4338 Location: 59333-60002 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YjgA-like (cl01147), RlmL (COG0116), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), DUF4338 (pfam14236)

Seq: DS021247.1 Olavius algarvensis Delta 1 endosymbiont Gutless_Worm_Scaffold45 genomic scaffold, whole genome shotgun sequence (142984 bp)
Overview 1 RT 1: 12407-14298 bp 2 RT 2: 74893-77595 bp Neighborhood of RT #1 [12407, 14298] RVT-CRISPR-like GIIM Neighborhood of RT #2 [74893, 77639] RVT-GII GIIM COG2928 Feature: gene Location: 12407-12658 bp Feature: gene Location: 12722-12946 bp Feature: gene Location: 13024-13587 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 13027-13246 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 13027-13246 bp Feature: domain Description: GIIM Note: maturase Location: 13300-13516 bp Feature: domain Description: GIIM Note: maturase Location: 13300-13516 bp Feature: gene Location: 13774-13977 bp Feature: gene Location: 14122-14298 bp Feature: gene Location: 74893-75207 bp Feature: gene Location: 75206-75457 bp Feature: gene Location: 75844-76470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75847-76135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 758 47-76135 bp Feature: domain Description: GIIM Note: maturase Location: 76183-76399 bp Feature: domain Description: GIIM Note: maturase Location: 7618 3-76399 bp Feature: gene Location: 76712-76915 bp Feature: gene Location: 77034-77639 bp Feature: domain Description: COG2928 Location: 77055-77595 bp Feature: domain Description: COG2928 Location: 77055-77595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, GIIM (pfam08388), RVT-GII, COG2928 (Uncharacterized membrane protein )

Seq: DS021253.1 Olavius algarvensis Delta 1 endosymbiont Gutless_Worm_Scaffold61 genomic scaffold, whole genome shotgun sequence (130989 bp)
Overview 1 RT 1: 79765-83721 bp Neighborhood of RT #1 [79765, 83721] YgdH RVT-GII GIIM Feature: gene Location: 79765-79935 bp Feature: gene Location: 80884-81762 bp Feature: domain Description: YgdH Location: 81058-81745 bp Feature: domain Description: YgdH Location: 81058-81745 bp Feature: gene Location: 82227-82853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82230-82518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82230-82518 bp Feature: domain Description: GIIM Note: maturase Location: 82566-82782 bp Feature: domain Description: GIIM Note: maturase Location: 82566-82782 bp Feature: gene Location: 83199-83450 bp Feature: gene Location: 83401-83721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YgdH (COG1611), RVT-GII, GIIM (pfam08388)

Seq: DS021258.1 Olavius algarvensis Delta 1 endosymbiont Gutless_Worm_Scaffold53 genomic scaffold, whole genome shotgun sequence (124441 bp)
Overview 1 RT 1: 54776-58216 bp Neighborhood of RT #1 [54776, 58216] CheB-CheR_fusion CheR RVT-GII GIIM Feature: gene Location: 54776-56110 bp Feature: domain Description: CheB-CheR_fusion Location: 54881-55418 bp Feature: domain Description: CheB-CheR_fusion Location: 54881-55418 bp Feature: domain Description: CheR Location: 55487-56000 bp Feature: domain Description: CheR Location: 55487-56000 bp Feature: gene Location: 56450-56635 bp Feature: gene Location: 56785-57468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56881-57127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56881-57127 bp Feature: domain Description: GIIM Note: maturase Location: 57181-57397 bp Feature: domain Description: GIIM Note: maturase Location: 57181-57397 bp Feature: gene Location: 57694-57945 bp Feature: gene Location: 57896-58216 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CheB-CheR_fusion (cd16434), CheR (pfam01739), RVT-GII, GIIM (pfam08388)

Seq: DS021265.1 Olavius algarvensis Delta 1 endosymbiont Gutless_Worm_Scaffold54 genomic scaffold, whole genome shotgun sequence (108147 bp)
Overview 1 RT 1: 100106-103943 bp Neighborhood of RT #1 [100106, 103996] RVT-GII GIIM octaheme_Shew PspE RHOD Feature: gene Location: 100106-100429 bp Feature: gene Location: 100428-100679 bp Feature: gene Location: 101022-101456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101028-101121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101028-1011 21 bp Feature: domain Description: GIIM Note: maturase Location: 101169-101385 bp Feature: domain Description: GIIM Note: maturase Location: 1011 69-101385 bp Feature: gene Location: 101758-103395 bp Feature: domain Description: octaheme_Shew Location: 101953-103264 bp Feature: domain Description: octaheme_Shew Location: 101953-103264 bp Feature: gene Location: 103499-103996 bp Feature: domain Description: PspE Location: 103511-103598 bp Feature: domain Description: PspE Location: 103511 -103598 bp Feature: domain Description: RHOD Location: 103712-103943 bp Feature: domain Description: RHOD Location: 103712-103943 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), octaheme_Shew (TIGR04315), PspE (COG0607), RHOD (smart00450)

Seq: DS021281.1 Olavius algarvensis Delta 1 endosymbiont Gutless_Worm_Scaffold85 genomic scaffold, whole genome shotgun sequence (82916 bp)
Overview 1 RT 1: 23399-26770 bp Neighborhood of RT #1 [23399, 26770] RVT-GII GIIM YkgJ Feature: gene Location: 23399-23554 bp Feature: gene Location: 23731-24120 bp Feature: gene Location: 24916-25350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24922-25015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24922-25015 bp Feature: domain Description: GIIM Note: maturase Location: 25063-25279 bp Feature: domain Description: GIIM Note: maturase Location: 25063-25279 bp Feature: gene Location: 25976-26758 bp Feature: domain Description: YkgJ Location: 26081-26324 bp Feature: domain Description: YkgJ Location: 26081-26324 bp Feature: gene Location: 26243-26770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YkgJ (COG0727)

Seq: DS021304.1 Olavius algarvensis Delta 1 endosymbiont Gutless_Worm_Scaffold101 genomic scaffold, whole genome shotgun sequence (63349 bp)
Overview 1 RT 1: 55817-60502 bp Neighborhood of RT #1 [55817, 60507] RVT-GII GIIM Tas PRK00507 Feature: gene Location: 55817-56155 bp Feature: gene Location: 56559-56810 bp Feature: gene Location: 57206-57832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57209-57497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57209-57497 bp Feature: domain Description: GIIM Note: maturase Location: 57545-57761 bp Feature: domain Description: GIIM Note: maturase Location: 57545-57761 bp Feature: gene Location: 58356-59207 bp Feature: domain Description: Tas Location: 58359-59187 bp Feature: domain Description: Tas Location: 58359-59187 bp Feature: gene Location: 59821-60507 bp Feature: domain Description: PRK00507 Location: 59854-60502 bp Feature: domain Description: PRK00507 Location: 59854-60502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Tas (COG0667), PRK00507 (deoxyribose-phosphate aldolase; Provisional)

Seq: DS021310.1 Olavius algarvensis Delta 1 endosymbiont Gutless_Worm_Scaffold113 genomic scaffold, whole genome shotgun sequence (53142 bp)
Overview 1 RT 1: 37166-40057 bp Neighborhood of RT #1 [37166, 40057] RVT-GII GIIM Feature: gene Location: 37166-37645 bp Feature: gene Location: 38080-38337 bp Feature: gene Location: 38419-39081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38425-38746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38425-38746 bp Feature: domain Description: GIIM Note: maturase Location: 38794-39010 bp Feature: domain Description: GIIM Note: maturase Location: 38794-39010 bp Feature: gene Location: 39540-39704 bp Feature: gene Location: 39893-40057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: DS021316.1 Olavius algarvensis Delta 1 endosymbiont Gutless_Worm_Scaffold127 genomic scaffold, whole genome shotgun sequence (47042 bp)
Overview 1 RT 1: 39261-42422 bp Neighborhood of RT #1 [39261, 42422] RVT-CRISPR-like GIIM GATase1_PfpI_2 Feature: gene Location: 39261-39512 bp Feature: gene Location: 39732-39890 bp Feature: gene Location: 40362-40925 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 40365-40584 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 40365-40584 bp Feature: domain Description: GIIM Note: maturase Location: 40638-40854 bp Feature: domain Description: GIIM Note: maturase Location: 40638-40854 bp Feature: gene Location: 41343-41975 bp Feature: domain Description: GATase1_PfpI_2 Location: 41376-41913 bp Feature: domain Description: GATase1_PfpI_2 Location: 41376-41913 bp Feature: gene Location: 42108-42422 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, GIIM (pfam08388), GATase1_PfpI_2 (cd03139)

Seq: DS021318.1 Olavius algarvensis Delta 1 endosymbiont Gutless_Worm_Scaffold133 genomic scaffold, whole genome shotgun sequence (45805 bp)
Overview 1 RT 1: 20096-22694 bp Neighborhood of RT #1 [20096, 22765] PRK14495 RVT-GII GIIM Feature: gene Location: 20096-20278 bp Feature: gene Location: 20581-21519 bp Feature: domain Description: PRK14495 Location: 20593-21514 bp Feature: domain Description: PRK14495 Location: 20593-21514 bp Feature: gene Location: 21755-22765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21812-22430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21812-22430 bp Feature: domain Description: GIIM Note: maturase Location: 22478-22694 bp Feature: domain Description: GIIM Note: maturase Location: 22478-22694 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14495 (putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/unknown domain fusion protein; Provisional), RVT-GII, GIIM (pfam08388)

Seq: DS021368.1 Olavius algarvensis Delta 1 endosymbiont Gutless_Worm_Scaffold240 genomic scaffold, whole genome shotgun sequence (15301 bp)
Overview 1 RT 1: 6635-11722 bp Neighborhood of RT #1 [6635, 11722] PHP_HisPPase ABC_ATPase RVT-GII GIIM Feature: gene Location: 6635-8968 bp Feature: domain Description: PHP_HisPPase Location: 6656-6866 bp Feature: domain Description: PHP_HisPPase Location: 6656-6866 bp Feature: domain Description: ABC_ATPase Location: 7448-8753 bp Feature: domain Description: ABC_ATPase Location: 7448-8753 bp Feature: gene Location: 9287-9568 bp Feature: gene Location: 9879-11186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10149-10761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10149-10761 bp Feature: domain Description: GIIM Note: maturase Location: 10815-11031 bp Feature: domain Description: GIIM Note: maturase Location: 10815-11031 bp Feature: gene Location: 11232-11555 bp Feature: gene Location: 11570-11722 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHP_HisPPase (cd07432), ABC_ATPase (pfam09818), RVT-GII, GIIM (pfam08388)