myRT

myRT report for GCA_001742345.1_ASM174234v1

Download annotations/find similar RTs

Seq: LAEU01000003.1 Burkholderia seminalis strain TC3.4.2R3 contig00003, whole genome shotgun sequence (416083 bp)
Overview 1 RT 1: 279550-285121 bp Neighborhood of RT #1 [279550, 285156] MFS_MucK Histone_HNS RVT-Retrons FIN dTDP_HR_like_SDR_e Feature: gene Location: 279550-280797 bp Feature: domain Description: MFS_MucK Location: 279640-280774 bp Feature: domain Description: MFS_MucK Location: 279640-280774 bp Feature: gene Location: 281070-281399 bp Feature: domain Description: Histone_HNS Location: 281091-281328 bp Feature: domain Description: Histone_HNS Location: 281 091 -281 328 bp Feature: gene Location: 281713-283062 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 282178-282814 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2821 78-28281 4 bp Feature: gene Location: 283351-284079 bp Feature: domain Description: FIN Location: 283684-284044 bp Feature: domain Description: FIN Location: 283684-284044 bp Feature: gene Location: 284191-285156 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 284230-285121 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 284230-2851 21 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), dTDP_HR_like_SDR_e (cd05254)

Seq: LAEU01000005.1 Burkholderia seminalis strain TC3.4.2R3 contig00005, whole genome shotgun sequence (334306 bp)
Overview 1 RT 1: 210900-214234 bp Neighborhood of RT #1 [210900, 214234] Avd_like RVT-DGRs Feature: gene Location: 210900-211433 bp Feature: gene Location: 211456-211734 bp Feature: domain Description: Avd_like Location: 211459-211711 bp Feature: domain Description: Avd_like Location: 2 11459-2 11711 bp Feature: gene Location: 211802-213073 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 212171-212858 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 12 171-2 12 858 bp Feature: gene Location: 213084-213479 bp Feature: gene Location: 213476-214234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs