myRT

myRT report for GCA_001746475.1_ASM174647v1

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Seq: MEHN01000001.1 Streptomyces agglomeratus strain 5-2-6, whole genome shotgun sequence (8348226 bp)
Overview 1 RT 1: 185860-189917 bp 2 RT 2: 7863797-7869587 bp Neighborhood of RT #1 [185860, 189916] DUF4062 HTH_23 Tra8 RVT_N RVT-GII GIIM Tra8 DUF4096 Neighborhood of RT #2 [7863797, 7869718] Transposase_20 DDE_Tnp_ISAZ013 RVT-GII GIIM DDE_Tnp_ISAZ013 COG5659 Feature: gene Location: 185860-186135 bp Ori: OEJ56813.1 Feature: domain Description: DUF4062 Location: 185866-186076 bp Feature: domain Description: DUF4062 Location: 1 85866-1 86076 bp Feature: gene Location: 186474-187340 bp Ori: OEJ56814.1 Feature: domain Description: HTH_23 Location: 186552-186633 bp Feature: domain Description: HTH_23 Location: 1 86552-1 86633 bp Feature: domain Description: Tra8 Location: 186732-187293 bp Feature: domain Description: Tra8 Location: 1 86732-1 87293 bp Feature: gene Location: 187580-189010 bp Feature: domain Description: RVT_N Location: 187583-187679 bp Feature: domain Description: RVT_N Location: 1 87583-1 87679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187739-188399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 87739-1 88399 bp Feature: domain Description: GIIM Note: maturase Location: 188456-188684 bp Feature: domain Description: GIIM Note: maturase Location: 1 88456-1 88684 bp Feature: gene Location: 189234-189680 bp Feature: domain Description: Tra8 Location: 189240-189666 bp Feature: domain Description: Tra8 Location: 1 89240-1 89666 bp Feature: gene Location: 189716-189916 bp Feature: domain Description: DUF4096 Location: 189755-189917 bp Feature: domain Description: DUF4096 Location: 1 89755-1 8991 7 bp Feature: gene Location: 7863797-7864540 bp Ori: OEJ63542.1 Feature: domain Description: Transposase_20 Location: 7864154-7864400 bp Feature: domain Description: Transposase_20 Location: 78641 54-7864400 bp Feature: gene Location: 7865209-7865883 bp Ori: OEJ62410.1 Feature: domain Description: DDE_Tnp_ISAZ013 Location: 7865212-7865434 bp Feature: domain Description: DDE_Tnp_ISAZ01 3 Location: 786521 2-7865434 bp Feature: gene Location: 7866586-7867749 bp Ori: OEJ62411.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7866703-7867363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7866703-7867363 bp Feature: domain Description: GIIM Note: maturase Location: 7867444-7867654 bp Feature: domain Description: GIIM Note: maturase Location: 7867444-7867654 bp Feature: gene Location: 7867836-7868801 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 7868127-7868802 bp Feature: domain Description: DDE_Tnp_ISAZ01 3 Location: 78681 27-7868802 bp Feature: gene Location: 7868840-7869718 bp Ori: OEJ63543.1 Feature: domain Description: COG5659 Location: 7868861-7869587 bp Feature: domain Description: COG5659 Location: 7868861 -7869587 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4062 (pfam13271), HTH_23 (pfam13384), Tra8 (COG2826), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF4096 (pfam13340), Transposase_20 (pfam02371), DDE_Tnp_ISAZ013 (pfam07592), COG5659 (SRSO17 transposase )

Seq: MEHN01000002.1 Streptomyces agglomeratus strain 5-2-6, whole genome shotgun sequence (529405 bp)
Overview 1 RT 1: 129691-137335 bp 2 RT 2: 184351-187638 bp 3 RT 3: 221950-226617 bp Neighborhood of RT #1 [129691, 137451] PnbA Tra8 RVT_N RVT-GII GIIM HTH_38 Tra8 TPR_10 TPR_10 TPR_10 TPR_10 TPR_10 TPR_10 TPR_10 Neighborhood of RT #2 [184351, 187751] PHA02517 InsE RVT-GII GIIM COG3464 nicotinamidase_related Neighborhood of RT #3 [221950, 226640] RVT-GII RVT-GII PHA02517 InsE Feature: gene Location: 129691-131193 bp Ori: OEJ56373.1 Feature: domain Description: PnbA Location: 129703-131164 bp Feature: domain Description: PnbA Location: 12 9703-131164 bp Feature: gene Location: 131356-131811 bp Feature: domain Description: Tra8 Location: 131374-131791 bp Feature: domain Description: Tra8 Location: 131374-131791 bp Feature: gene Location: 131885-133687 bp Ori: OEJ56642.1 Feature: domain Description: RVT_N Location: 131969-132206 bp Feature: domain Description: RVT_N Location: 131969-132 2 06 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132266-132926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 2 66-132 92 6 bp Feature: domain Description: GIIM Note: maturase Location: 132983-133211 bp Feature: domain Description: GIIM Note: maturase Location: 132 983-1332 11 bp Feature: gene Location: 134367-135095 bp Feature: domain Description: HTH_38 Location: 134406-134481 bp Feature: domain Description: HTH_38 Location: 134406-134481 bp Feature: domain Description: Tra8 Location: 134553-135096 bp Feature: domain Description: Tra8 Location: 134553-135096 bp Feature: gene Location: 135253-137451 bp Ori: OEJ56374.1 Feature: domain Description: TPR_10 Location: 136465-136582 bp Feature: domain Description: TPR_10 Location: 136465-136582 bp Feature: domain Description: TPR_10 Location: 136585-136708 bp Feature: domain Description: TPR_10 Location: 136585-136708 bp Feature: domain Description: TPR_10 Location: 136711-136834 bp Feature: domain Description: TPR_10 Location: 136711-136834 bp Feature: domain Description: TPR_10 Location: 136837-136954 bp Feature: domain Description: TPR_10 Location: 136837-136954 bp Feature: domain Description: TPR_10 Location: 136963-137086 bp Feature: domain Description: TPR_10 Location: 136963-137086 bp Feature: domain Description: TPR_10 Location: 137089-137212 bp Feature: domain Description: TPR_10 Location: 137089-1372 12 bp Feature: domain Description: TPR_10 Location: 137215-137335 bp Feature: domain Description: TPR_10 Location: 1372 15-137335 bp Feature: gene Location: 184351-185232 bp Ori: OEJ56409.1 Feature: domain Description: PHA02517 Location: 184426-185209 bp Feature: domain Description: PHA02 517 Location: 18442 6-1852 09 bp Feature: gene Location: 185229-185519 bp Ori: OEJ56410.1 Feature: domain Description: InsE Location: 185241-185508 bp Feature: domain Description: InsE Location: 1852 41-185508 bp Feature: gene Location: 185590-186756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 185593-186289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 185593-1862 89 bp Feature: domain Description: GIIM Note: maturase Location: 186358-186580 bp Feature: domain Description: GIIM Note: maturase Location: 186358-186580 bp Feature: gene Location: 186898-187095 bp Ori: OEJ56411.1 Feature: domain Description: COG3464 Location: 186928-187093 bp Feature: domain Description: COG3464 Location: 18692 8-187093 bp Feature: gene Location: 187188-187751 bp Ori: OEJ56412.1 Feature: domain Description: nicotinamidase_related Location: 187221-187638 bp Feature: domain Description: nicotinamidase_related Location: 1872 2 1-187638 bp Feature: gene Location: 221950-223777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 222217-222607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 2 2 17-2 2 2 607 bp Feature: gene Location: 223901-225396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 224165-224960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 4165-2 2 4960 bp Feature: gene Location: 225418-226335 bp Ori: OEJ56443.1 Feature: domain Description: PHA02517 Location: 225478-226288 bp Feature: domain Description: PHA02 517 Location: 2 2 5478-2 2 62 88 bp Feature: gene Location: 226332-226640 bp Ori: OEJ56444.1 Feature: domain Description: InsE Location: 226347-226617 bp Feature: domain Description: InsE Location: 2 2 6347-2 2 6617 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PnbA (COG2272), Tra8 (COG2826), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HTH_38 (pfam13936), TPR_10 (pfam13374), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), COG3464 (Transposase )
nicotinamidase_related (cd01014)

Seq: MEHN01000003.1 Streptomyces agglomeratus strain 5-2-6, whole genome shotgun sequence (49567 bp)
Overview 1 RT 1: 17303-23090 bp Neighborhood of RT #1 [17303, 23221] Transposase_20 RVT-GII GIIM DDE_Tnp_ISAZ013 COG5659 Feature: gene Location: 17303-18046 bp Ori: OEJ56282.1 Feature: domain Description: Transposase_20 Location: 17660-17906 bp Feature: domain Description: Transposase_20 Location: 17660-17906 bp Feature: gene Location: 18715-19101 bp Feature: gene Location: 20091-21254 bp Ori: OEJ56263.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20208-20868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20208-20868 bp Feature: domain Description: GIIM Note: maturase Location: 20949-21159 bp Feature: domain Description: GIIM Note: maturase Location: 20949-21159 bp Feature: gene Location: 21229-22212 bp Ori: OEJ56264.1 Feature: domain Description: DDE_Tnp_ISAZ013 Location: 21427-22009 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 21427-22009 bp Feature: gene Location: 22853-23221 bp Ori: OEJ56265.1 Feature: domain Description: COG5659 Location: 22862-23090 bp Feature: domain Description: COG5659 Location: 22862-23 090 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_20 (pfam02371), RVT-GII, GIIM (pfam08388), DDE_Tnp_ISAZ013 (pfam07592), COG5659 (SRSO17 transposase )