myRT

myRT report for GCA_001747625.1_ASM174762v1

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Seq: LNPJ01000006.1 Staphylococcus saprophyticus strain CE6 contig006, whole genome shotgun sequence (109130 bp)
Overview 1 RT 1: 99477-104666 bp Neighborhood of RT #1 [99477, 104666] YycJ-like_MBL-fold SPOUT_MTase RVT-AbiA HEPN_AbiA_CTD Feature: gene Location: 99477-100268 bp Ori: OEK97243.1 Feature: domain Description: YycJ-like_MBL-fold Location: 99492-100053 bp Feature: domain Description: YycJ-like_MBL-fold Location: 99492-1 00053 bp Feature: gene Location: 100867-101346 bp Ori: OEK97244.1 Feature: domain Description: SPOUT_MTase Location: 100870-101341 bp Feature: domain Description: SPOUT_MTase Location: 1 00870-1 01 341 bp Feature: gene Location: 101448-103307 bp Ori: OEK97245.1 Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 101793-102297 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 1 01 793-1 02297 bp Feature: domain Description: HEPN_AbiA_CTD Location: 102918-103293 bp Feature: domain Description: HEPN_AbiA_CTD Location: 1 0291 8-1 03293 bp Feature: gene Location: 103341-103658 bp Feature: gene Location: 103764-104666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YycJ-like_MBL-fold (cd07733), SPOUT_MTase (pfam02590), RVT-AbiA, HEPN_AbiA_CTD (pfam18732)

Seq: LNPJ01000019.1 Staphylococcus saprophyticus strain CE6 contig019, whole genome shotgun sequence (37945 bp)
Overview 1 RT 1: 29517-33091 bp Neighborhood of RT #1 [29517, 33091] RVT-Retrons PinE Feature: gene Location: 29517-29699 bp Feature: gene Location: 29769-30026 bp Feature: gene Location: 30094-31854 bp Ori: OEK94033.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30220-30820 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 302 2 0-3082 0 bp Feature: gene Location: 32159-32779 bp Ori: OEK94034.1 Feature: domain Description: PinE Location: 32162-32750 bp Feature: domain Description: PinE Location: 32 162 -32 750 bp Feature: gene Location: 32834-33091 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PinE (COG1961)