myRT

myRT report for GCA_001748365.1_ASM174836v1

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Seq: BDHH01000001.1 Fusibacter sp. 3D3 DNA, contig: 58, whole genome shotgun sequence (439460 bp)
Overview 1 RT 1: 4343-7757 bp Neighborhood of RT #1 [4343, 7795] PhdYeFM_antitox RVT-GII YcfA HicB Feature: gene Location: 4343-5071 bp Feature: gene Location: 5757-6098 bp Ori: GAU75419.1 Feature: domain Description: PhdYeFM_antitox Location: 5799-5988 bp Feature: domain Description: PhdYeFM_antitox Location: 5799-5988 bp Feature: gene Location: 6393-7190 bp Ori: GAU75420.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6396-6816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6396-681 6 bp Feature: gene Location: 7362-7589 bp Ori: GAU75421.1 Feature: domain Description: YcfA Location: 7371-7560 bp Feature: domain Description: YcfA Location: 7371 -7560 bp Feature: gene Location: 7589-7795 bp Ori: GAU75422.1 Feature: domain Description: HicB Location: 7601-7757 bp Feature: domain Description: HicB Location: 7601 -7757 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhdYeFM_antitox (pfam02604), RVT-GII, YcfA (COG1724), HicB (pfam05534)

Seq: BDHH01000014.1 Fusibacter sp. 3D3 DNA, contig: 24, whole genome shotgun sequence (155641 bp)
Overview 1 RT 1: 118233-122901 bp Neighborhood of RT #1 [118233, 122942] Cas2_I_II_III Cas1_I-II-III RVT-CRISPR AE_Prim_S_like RNase_HII_bacteria_HIII_like Feature: gene Location: 118233-118532 bp Ori: GAU78637.1 Feature: domain Description: Cas2_I_II_III Location: 118254-118500 bp Feature: domain Description: Cas2 _I_II_III Location: 1182 54-118500 bp Feature: gene Location: 118529-119518 bp Ori: GAU78638.1 Feature: domain Description: Cas1_I-II-III Location: 118538-119456 bp Feature: domain Description: Cas1_I-II-III Location: 118538-119456 bp Feature: gene Location: 119531-122014 bp Ori: GAU78639.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 119726-120317 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 11972 6-12 0317 bp Feature: domain Description: AE_Prim_S_like Location: 120800-121214 bp Feature: domain Description: AE_Prim_S_like Location: 12 0800-12 12 14 bp Feature: gene Location: 122001-122942 bp Ori: GAU78640.1 Feature: domain Description: RNase_HII_bacteria_HIII_like Location: 122274-122901 bp Feature: domain Description: RNase_HII_bacteria_HIII_like Location: 12 2 2 74-12 2 901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), Cas1_I-II-III (cl00656), RVT-CRISPR, AE_Prim_S_like (cl01287), RNase_HII_bacteria_HIII_like (cd06590)