myRT

myRT report for GCA_001748765.1_ASM174876v1

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Seq: MIVV01000011.1 Escherichia coli strain AF85 contig_0011, whole genome shotgun sequence (447049 bp)
Overview 1 RT 1: 414538-417968 bp Neighborhood of RT #1 [414538, 418042] ArgR RVT-GII GIIM RVT-GII CdiI_3 Ntox28 Feature: gene Location: 414538-415017 bp Ori: OEL97281.1 Feature: domain Description: ArgR Location: 414571-415003 bp Feature: domain Description: ArgR Location: 41 4571 -41 5003 bp Feature: gene Location: 415255-415473 bp Feature: gene Location: 415723-416535 bp Ori: OEL97283.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 415732-416182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 5732-41 61 82 bp Feature: domain Description: GIIM Note: maturase Location: 416233-416398 bp Feature: domain Description: GIIM Note: maturase Location: 41 6233-41 6398 bp Feature: gene Location: 416532-417014 bp Ori: OEL97284.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416853-416940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 6853-41 6940 bp Feature: gene Location: 417462-417848 bp Ori: OEL97285.1 Feature: domain Description: CdiI_3 Location: 417486-417762 bp Feature: domain Description: CdiI_3 Location: 41 7486-41 7762 bp Feature: gene Location: 417845-418042 bp Ori: OEL97286.1 Feature: domain Description: Ntox28 Location: 417851-417968 bp Feature: domain Description: Ntox28 Location: 41 7851 -41 7968 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArgR (COG1438), RVT-GII, GIIM (pfam08388), CdiI_3 (pfam18616), Ntox28 (pfam15605)

Seq: MIVV01000010.1 Escherichia coli strain AF85 contig_0010, whole genome shotgun sequence (194707 bp)
Overview 1 RT 1: 102925-109034 bp Neighborhood of RT #1 [102925, 109093] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase SfsB Feature: gene Location: 102925-103845 bp Ori: OEL97408.1 Feature: domain Description: AbiEii Location: 102967-103708 bp Feature: domain Description: AbiEii Location: 102 967-103708 bp Feature: gene Location: 103832-104614 bp Ori: OEL97409.1 Feature: domain Description: AbiEi_3_N Location: 103844-104105 bp Feature: domain Description: AbiEi_3_N Location: 103844-104105 bp Feature: domain Description: AbiEi_3 Location: 104120-104573 bp Feature: domain Description: AbiEi_3 Location: 10412 0-104573 bp Feature: gene Location: 104930-108139 bp Ori: OEL97410.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 105458-105947 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 105458-105947 bp Feature: domain Description: nitrilase Location: 107453-108050 bp Feature: domain Description: nitrilase Location: 107453-108050 bp Feature: gene Location: 108486-108956 bp Feature: gene Location: 108953-109093 bp Ori: OEL97412.1 Feature: domain Description: SfsB Location: 108962-109034 bp Feature: domain Description: SfsB Location: 108962 -109034 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), SfsB (COG3423)