myRT

myRT report for GCA_001748815.1_ASM174881v1

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Seq: MIVY01000055.1 Escherichia coli strain AF97 contig_0055, whole genome shotgun sequence (57012 bp)
Overview 1 RT 1: 4006-7496 bp Neighborhood of RT #1 [4006, 7510] Ntox28 CdiI_3 RVT-GII RVT-GII GIIM ArgR Feature: gene Location: 4006-4203 bp Ori: OEM04834.1 Feature: domain Description: Ntox28 Location: 4012-4129 bp Feature: domain Description: Ntox28 Location: 401 2-41 29 bp Feature: gene Location: 4200-4586 bp Ori: OEM04835.1 Feature: domain Description: CdiI_3 Location: 4224-4500 bp Feature: domain Description: CdiI_3 Location: 4224-4500 bp Feature: gene Location: 5034-5516 bp Ori: OEM04836.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5355-5442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5355-5442 bp Feature: gene Location: 5513-6325 bp Ori: OEM04837.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5522-5972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5522-5972 bp Feature: domain Description: GIIM Note: maturase Location: 6023-6188 bp Feature: domain Description: GIIM Note: maturase Location: 6023-61 88 bp Feature: gene Location: 6575-6793 bp Feature: gene Location: 7031-7510 bp Ori: OEM04839.1 Feature: domain Description: ArgR Location: 7064-7496 bp Feature: domain Description: ArgR Location: 7064-7496 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ntox28 (pfam15605), CdiI_3 (pfam18616), RVT-GII, GIIM (pfam08388), ArgR (COG1438)

Seq: MIVY01000016.1 Escherichia coli strain AF97 contig_0016, whole genome shotgun sequence (130293 bp)
Overview 1 RT 1: 122406-128869 bp Neighborhood of RT #1 [122406, 129867] mutS1 INT_Rci_Hp1_C INT_P4_C RVT-UG3 RVT-UG8 Feature: gene Location: 122406-124973 bp Ori: OEM10307.1 Feature: domain Description: mutS1 Location: 122442-124962 bp Feature: domain Description: mutS1 Location: 12 2 442 -12 4962 bp Feature: gene Location: 125133-126593 bp Ori: OEM10301.1 Feature: domain Description: INT_Rci_Hp1_C Location: 125508-125715 bp Feature: domain Description: INT_Rci_Hp1_C Location: 12 5508-12 5715 bp Feature: domain Description: INT_P4_C Location: 125934-126471 bp Feature: domain Description: INT_P4_C Location: 12 5934-12 6471 bp Feature: gene Location: 126590-127852 bp Ori: OEM10302.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 126872-127367 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 12 6872 -12 7367 bp Feature: gene Location: 127849-129867 bp Ori: OEM10303.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 128419-128869 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 12 8419-12 8869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mutS1 (TIGR01070), INT_Rci_Hp1_C (cd00796), INT_P4_C (cd00801), RVT-UG3, RVT-UG8