myRT

myRT report for GCA_001748895.1_ASM174889v1

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Seq: MIWD01000081.1 Escherichia coli strain AF7658-3 contig_0081, whole genome shotgun sequence (31184 bp)
Overview 1 RT 1: 19675-24526 bp Neighborhood of RT #1 [19675, 24555] RVT_N RVT-GII GIIM HNHc LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 Feature: gene Location: 19675-19776 bp Feature: gene Location: 20033-20260 bp Feature: gene Location: 20834-22501 bp Feature: RT Description: RVT_N Location: 20882-21119 bp Feature: RT Description: RVT_N Location: 20882-21 1 1 9 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21170-21809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 1 70-21 809 bp Feature: domain Description: GIIM Note: maturase Location: 21863-22097 bp Feature: domain Description: GIIM Note: maturase Location: 21 863-22097 bp Feature: domain Description: HNHc Note: nucleases Location: 22307-22466 bp Feature: domain Description: HNHc Note: nucleases Location: 22307-22466 bp Feature: gene Location: 22617-24188 bp Feature: domain Description: LZ_Tnp_IS66 Location: 22755-22980 bp Feature: domain Description: LZ_Tnp_IS66 Location: 22755-22980 bp Feature: domain Description: zf-IS66 Location: 23001-23133 bp Feature: domain Description: zf-IS66 Location: 23001 -231 33 bp Feature: domain Description: DDE_Tnp_IS66 Location: 23178-24033 bp Feature: domain Description: DDE_Tnp_IS66 Location: 231 78-24033 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 24054-24165 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 24054-241 65 bp Feature: gene Location: 24208-24555 bp Feature: domain Description: TnpB_IS66 Location: 24235-24526 bp Feature: domain Description: TnpB_IS66 Location: 24235-24526 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717)

Seq: MIWD01000095.1 Escherichia coli strain AF7658-3 contig_0095, whole genome shotgun sequence (8785 bp)
Overview 1 RT 1: 6028-8584 bp Neighborhood of RT #1 [6028, 8584] antidote_HigA HigB-like_toxin RVT-GII Feature: gene Location: 6028-6309 bp Feature: domain Description: antidote_HigA Location: 6046-6268 bp Feature: domain Description: antidote_HigA Location: 6046-62 68 bp Feature: gene Location: 6318-6599 bp Feature: domain Description: HigB-like_toxin Location: 6327-6597 bp Feature: domain Description: HigB-like_toxin Location: 632 7-6597 bp Feature: gene Location: 6764-8007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6968-7562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6968-7562 bp Feature: gene Location: 8004-8387 bp Feature: gene Location: 8406-8584 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT antidote_HigA (TIGR02607), HigB-like_toxin (pfam05015), RVT-GII