myRT

myRT report for GCA_001748915.1_ASM174891v1

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Seq: MIWF01000064.1 Escherichia coli strain AF7759-1 contig_0068, whole genome shotgun sequence (46970 bp)
Overview 1 RT 1: 5038-9529 bp Neighborhood of RT #1 [5038, 9531] RVT-GII GIIM YhhI YhhI PRK01271 Feature: gene Location: 5038-5436 bp Feature: gene Location: 6081-6425 bp Feature: gene Location: 6951-8273 bp Ori: OEM43371.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7227-7884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7227-7884 bp Feature: domain Description: GIIM Note: maturase Location: 7968-8178 bp Feature: domain Description: GIIM Note: maturase Location: 7968-81 78 bp Feature: gene Location: 8573-9271 bp Ori: OEM43404.1 Feature: domain Description: YhhI Location: 8579-8846 bp Feature: domain Description: YhhI Location: 8579-8846 bp Feature: domain Description: YhhI Location: 8903-9254 bp Feature: domain Description: YhhI Location: 8903-9254 bp Feature: gene Location: 9304-9531 bp Ori: OEM43372.1 Feature: domain Description: PRK01271 Location: 9307-9529 bp Feature: domain Description: PRK01 271 Location: 9307-9529 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YhhI (COG5433), PRK01271 (tautomerase PptA)

Seq: MIWF01000025.1 Escherichia coli strain AF7759-1 contig_0025, whole genome shotgun sequence (241097 bp)
Overview 1 RT 1: 99615-103045 bp Neighborhood of RT #1 [99615, 103119] ArgR RVT-GII GIIM RVT-GII CdiI_3 Ntox28 Feature: gene Location: 99615-100094 bp Ori: OEM46645.1 Feature: domain Description: ArgR Location: 99648-100080 bp Feature: domain Description: ArgR Location: 99648-100080 bp Feature: gene Location: 100332-100550 bp Feature: gene Location: 100800-101612 bp Ori: OEM46647.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100809-101259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100809-1012 59 bp Feature: domain Description: GIIM Note: maturase Location: 101310-101475 bp Feature: domain Description: GIIM Note: maturase Location: 101310-101475 bp Feature: gene Location: 101609-102091 bp Ori: OEM46648.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101930-102017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101930-102 017 bp Feature: gene Location: 102539-102925 bp Ori: OEM46649.1 Feature: domain Description: CdiI_3 Location: 102563-102839 bp Feature: domain Description: CdiI_3 Location: 102 563-102 839 bp Feature: gene Location: 102922-103119 bp Ori: OEM46650.1 Feature: domain Description: Ntox28 Location: 102928-103045 bp Feature: domain Description: Ntox2 8 Location: 102 92 8-103045 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArgR (COG1438), RVT-GII, GIIM (pfam08388), CdiI_3 (pfam18616), Ntox28 (pfam15605)

Seq: MIWF01000022.1 Escherichia coli strain AF7759-1 contig_0022, whole genome shotgun sequence (176253 bp)
Overview 1 RT 1: 120375-131224 bp Neighborhood of RT #1 [120375, 131224] DUF5507 DUF5508 AIDA AIDA AIDA AIDA AIDA AIDA AIDA AIDA AIDA AIDA AIDA AIDA AidA RVT-Retrons DUF932 Feature: gene Location: 120375-121746 bp Feature: domain Description: DUF5507 Location: 120378-120855 bp Feature: domain Description: DUF5507 Location: 1203 78-120855 bp Feature: domain Description: DUF5508 Location: 120960-121125 bp Feature: domain Description: DUF5508 Location: 120960-121125 bp Feature: gene Location: 122937-127280 bp Ori: OEM47144.1 Feature: domain Description: AIDA Location: 122943-123081 bp Feature: domain Description: AIDA Location: 122943 -123 081 bp Feature: domain Description: AIDA Location: 123093-123189 bp Feature: domain Description: AIDA Location: 123 093 -123 189 bp Feature: domain Description: AIDA Location: 123342-123462 bp Feature: domain Description: AIDA Location: 123 3 42-123 462 bp Feature: domain Description: AIDA Location: 123552-123738 bp Feature: domain Description: AIDA Location: 123 552-123 73 8 bp Feature: domain Description: AIDA Location: 123849-124002 bp Feature: domain Description: AIDA Location: 123 849-124002 bp Feature: domain Description: AIDA Location: 124050-124236 bp Feature: domain Description: AIDA Location: 124050-12423 6 bp Feature: domain Description: AIDA Location: 124332-124515 bp Feature: domain Description: AIDA Location: 1243 3 2-124515 bp Feature: domain Description: AIDA Location: 124623-124719 bp Feature: domain Description: AIDA Location: 124623 -124719 bp Feature: domain Description: AIDA Location: 124767-124890 bp Feature: domain Description: AIDA Location: 124767-124890 bp Feature: domain Description: AIDA Location: 124926-125112 bp Feature: domain Description: AIDA Location: 124926-125112 bp Feature: domain Description: AIDA Location: 125121-125274 bp Feature: domain Description: AIDA Location: 125121-125274 bp Feature: domain Description: AIDA Location: 125316-125496 bp Feature: domain Description: AIDA Location: 1253 16-125496 bp Feature: domain Description: AidA Location: 126144-127137 bp Feature: domain Description: AidA Location: 126144-12713 7 bp Feature: gene Location: 127925-129649 bp Ori: OEM47145.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 128063-128687 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 128063 -128687 bp Feature: gene Location: 129900-130721 bp Ori: OEM47146.1 Feature: domain Description: DUF932 Location: 130011-130686 bp Feature: domain Description: DUF93 2 Location: 13 0011-13 0686 bp Feature: gene Location: 130796-131224 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5507 (pfam17612), DUF5508 (pfam17621), AIDA (pfam16168), AidA (COG3468), RVT-Retrons, DUF932 (pfam06067)