myRT

myRT report for GCA_001749285.1_ASM174928v1

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Seq: MIWQ01000004.1 Escherichia coli strain K6636 contig_0004, whole genome shotgun sequence (247595 bp)
Overview 1 RT 1: 43483-46972 bp Neighborhood of RT #1 [43483, 46986] Ntox28 CdiI_3 RVT-GII RVT-GII GIIM ArgR Feature: gene Location: 43483-43680 bp Ori: OEN04676.1 Feature: domain Description: Ntox28 Location: 43489-43606 bp Feature: domain Description: Ntox28 Location: 43489-43606 bp Feature: gene Location: 43677-44063 bp Ori: OEN04677.1 Feature: domain Description: CdiI_3 Location: 43701-43977 bp Feature: domain Description: CdiI_3 Location: 43701 -43977 bp Feature: gene Location: 44510-44992 bp Ori: OEN04678.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44831-44918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44831 -4491 8 bp Feature: gene Location: 44989-45801 bp Ori: OEN04679.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44998-45448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44998-45448 bp Feature: domain Description: GIIM Note: maturase Location: 45499-45664 bp Feature: domain Description: GIIM Note: maturase Location: 45499-45664 bp Feature: gene Location: 46051-46269 bp Feature: gene Location: 46507-46986 bp Ori: OEN04681.1 Feature: domain Description: ArgR Location: 46540-46972 bp Feature: domain Description: ArgR Location: 46540-46972 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ntox28 (pfam15605), CdiI_3 (pfam18616), RVT-GII, GIIM (pfam08388), ArgR (COG1438)

Seq: MIWQ01000012.1 Escherichia coli strain K6636 contig_0012, whole genome shotgun sequence (73019 bp)
Overview 1 RT 1: 57141-60705 bp Neighborhood of RT #1 [57141, 60731] RVT-Retrons PBP2_CrgA_like_5 Feature: gene Location: 57141-57374 bp Feature: gene Location: 57575-58543 bp Feature: gene Location: 58530-59462 bp Ori: OEN02471.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 58632-59223 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 58632 -592 2 3 bp Feature: gene Location: 59457-59939 bp Feature: gene Location: 60321-60731 bp Ori: OEN02473.1 Feature: domain Description: PBP2_CrgA_like_5 Location: 60393-60705 bp Feature: domain Description: PBP2 _CrgA_like_5 Location: 60393-60705 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PBP2_CrgA_like_5 (cd08474)