myRT

myRT report for GCA_001749315.1_ASM174931v1

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Seq: MIWW01000058.1 Escherichia coli strain VL115 contig_0058, whole genome shotgun sequence (74273 bp)
Overview 1 RT 1: 65483-69824 bp Neighborhood of RT #1 [65483, 69838] LRAT YdeI RVT-GII GIIM AcfC Feature: gene Location: 65483-66184 bp Feature: domain Description: LRAT Location: 65495-65801 bp Feature: domain Description: LRAT Location: 65495-65801 bp Feature: gene Location: 66467-66853 bp Feature: domain Description: YdeI Location: 66470-66851 bp Feature: domain Description: YdeI Location: 66470-66851 bp Feature: gene Location: 67185-68555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67521-68133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67521 -681 33 bp Feature: domain Description: GIIM Note: maturase Location: 68193-68397 bp Feature: domain Description: GIIM Note: maturase Location: 681 93-68397 bp Feature: gene Location: 68552-68920 bp Feature: gene Location: 69077-69838 bp Feature: domain Description: AcfC Location: 69083-69824 bp Feature: domain Description: AcfC Location: 69083-69824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LRAT (pfam04970), YdeI (COG4430), RVT-GII, GIIM (pfam08388), AcfC (COG4588)

Seq: MIWW01000011.1 Escherichia coli strain VL115 contig_0011, whole genome shotgun sequence (42411 bp)
Overview 1 RT 1: 30752-34857 bp Neighborhood of RT #1 [30752, 34857] DUF932 RVT-GII Intron_maturas2 HNHc DUF932 Feature: gene Location: 30752-30997 bp Feature: gene Location: 30997-31437 bp Feature: domain Description: DUF932 Location: 31009-31402 bp Feature: domain Description: DUF932 Location: 31009-31402 bp Feature: gene Location: 31556-33256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31739-32534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31739-32 534 bp Feature: domain Description: Intron_maturas2 Location: 32660-32885 bp Feature: domain Description: Intron_maturas2 Location: 32 660-32 885 bp Feature: domain Description: HNHc Note: nucleases Location: 33080-33230 bp Feature: domain Description: HNHc Note: nucleases Location: 33080-332 30 bp Feature: gene Location: 33844-34227 bp Feature: domain Description: DUF932 Location: 33955-34225 bp Feature: domain Description: DUF932 Location: 33955-342 2 5 bp Feature: gene Location: 34447-34857 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)