myRT

myRT report for GCA_001749385.1_ASM174938v1

Download annotations/find similar RTs

Seq: MIXA01000030.1 Escherichia coli strain VL123 contig_0030, whole genome shotgun sequence (17290 bp)
Overview 1 RT 1: 7219-15053 bp Neighborhood of RT #1 [7219, 15082] ESPR O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT autotrans_barl DDE_Tnp_IS66_C RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 7219-11142 bp Feature: domain Description: ESPR Location: 7222-7291 bp Feature: domain Description: ESPR Location: 7222-7291 bp Feature: domain Description: O_hepto_targRPT Location: 7387-7498 bp Feature: domain Description: O_hepto_targRPT Location: 7387-7498 bp Feature: domain Description: O_hepto_targRPT Location: 7504-7612 bp Feature: domain Description: O_hepto_targRPT Location: 7504-761 2 bp Feature: domain Description: O_hepto_targRPT Location: 7615-7723 bp Feature: domain Description: O_hepto_targRPT Location: 761 5-7723 bp Feature: domain Description: O_hepto_targRPT Location: 7735-7837 bp Feature: domain Description: O_hepto_targRPT Location: 7735-7837 bp Feature: domain Description: O_hepto_targRPT Location: 7840-7948 bp Feature: domain Description: O_hepto_targRPT Location: 7840-7948 bp Feature: domain Description: O_hepto_targRPT Location: 7954-8062 bp Feature: domain Description: O_hepto_targRPT Location: 7954-8062 bp Feature: domain Description: O_hepto_targRPT Location: 8068-8176 bp Feature: domain Description: O_hepto_targRPT Location: 8068-81 76 bp Feature: domain Description: O_hepto_targRPT Location: 8185-8290 bp Feature: domain Description: O_hepto_targRPT Location: 81 85-8290 bp Feature: domain Description: O_hepto_targRPT Location: 8293-8401 bp Feature: domain Description: O_hepto_targRPT Location: 8293-8401 bp Feature: domain Description: O_hepto_targRPT Location: 8404-8515 bp Feature: domain Description: O_hepto_targRPT Location: 8404-851 5 bp Feature: domain Description: O_hepto_targRPT Location: 8518-8629 bp Feature: domain Description: O_hepto_targRPT Location: 851 8-8629 bp Feature: domain Description: O_hepto_targRPT Location: 8632-8740 bp Feature: domain Description: O_hepto_targRPT Location: 8632-8740 bp Feature: domain Description: O_hepto_targRPT Location: 8743-8848 bp Feature: domain Description: O_hepto_targRPT Location: 8743-8848 bp Feature: domain Description: O_hepto_targRPT Location: 8854-8962 bp Feature: domain Description: O_hepto_targRPT Location: 8854-8962 bp Feature: domain Description: O_hepto_targRPT Location: 8965-9076 bp Feature: domain Description: O_hepto_targRPT Location: 8965-9076 bp Feature: domain Description: O_hepto_targRPT Location: 9082-9187 bp Feature: domain Description: O_hepto_targRPT Location: 9082-91 87 bp Feature: domain Description: O_hepto_targRPT Location: 9244-9352 bp Feature: domain Description: O_hepto_targRPT Location: 9244-9352 bp Feature: domain Description: autotrans_barl Location: 9817-11140 bp Feature: domain Description: autotrans_barl Location: 981 7-1 1 1 40 bp Feature: gene Location: 11320-11511 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 11377-11488 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 1 377-1 1 488 bp Feature: gene Location: 11582-12814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11783-12437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 783-1 2437 bp Feature: domain Description: GIIM Note: maturase Location: 12515-12737 bp Feature: domain Description: GIIM Note: maturase Location: 1 251 5-1 2737 bp Feature: gene Location: 13276-14715 bp Feature: domain Description: LZ_Tnp_IS66 Location: 13414-13639 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 341 4-1 3639 bp Feature: domain Description: zf-IS66 Location: 13660-13792 bp Feature: domain Description: zf-IS66 Location: 1 3660-1 3792 bp Feature: domain Description: DDE_Tnp_IS66 Location: 13837-14674 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 3837-1 4674 bp Feature: gene Location: 14735-15082 bp Feature: domain Description: TnpB_IS66 Location: 14762-15053 bp Feature: domain Description: TnpB_IS66 Location: 1 4762-1 5053 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), TnpB_IS66 (pfam05717), ESPR (pfam13018), O_hepto_targRPT (TIGR04415), autotrans_barl (TIGR01414)