myRT

myRT report for GCA_001749585.1_ASM174958v1

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Seq: MIXN01000020.1 Escherichia coli strain VL2762-4 contig_0020, whole genome shotgun sequence (39710 bp)
Overview 1 RT 1: 26701-29794 bp Neighborhood of RT #1 [26701, 29794] PHA02517 RVT-GII GIIM Feature: gene Location: 26701-26958 bp Feature: gene Location: 27041-27528 bp Feature: domain Description: PHA02517 Location: 27044-27215 bp Feature: domain Description: PHA0251 7 Location: 27044-2721 5 bp Feature: gene Location: 27609-29117 bp Ori: OEO10371.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27867-28599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27867-28599 bp Feature: domain Description: GIIM Note: maturase Location: 28674-28872 bp Feature: domain Description: GIIM Note: maturase Location: 28674-28872 bp Feature: gene Location: 29086-29511 bp Feature: gene Location: 29426-29794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: MIXN01000011.1 Escherichia coli strain VL2762-4 contig_0011, whole genome shotgun sequence (81735 bp)
Overview 1 RT 1: 4912-9532 bp Neighborhood of RT #1 [4912, 9537] Peptidase_S74 RVT-UG17 SLATT_5 PRK10597 Feature: gene Location: 4912-6729 bp Ori: OEO11921.1 Feature: domain Description: Peptidase_S74 Location: 6355-6502 bp Feature: domain Description: Peptidase_S74 Location: 6355-6502 bp Feature: gene Location: 6772-7059 bp Feature: gene Location: 7167-8537 bp Ori: OEO11849.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 7395-8001 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 7395-8001 bp Feature: gene Location: 8515-9066 bp Ori: OEO11850.1 Feature: domain Description: SLATT_5 Location: 8521-9037 bp Feature: domain Description: SLATT_5 Location: 852 1-9037 bp Feature: gene Location: 9289-9537 bp Ori: OEO11851.1 Feature: domain Description: PRK10597 Location: 9292-9532 bp Feature: domain Description: PRK10597 Location: 92 92 -9532 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_S74 (pfam13884), RVT-UG17, SLATT_5 (pfam18160), PRK10597 (DNA damage-inducible protein I; Provisional)