myRT

myRT report for GCA_001751505.1_ASM175150v1

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Seq: MJSN01000021.1 Listeria monocytogenes strain BCW_2357 PROKKA_contig000021, whole genome shotgun sequence (1172673 bp)
Overview 1 RT 1: 886904-892481 bp Neighborhood of RT #1 [886904, 892481] SpoT Cah RVT-Retrons HipB ImmA Feature: gene Location: 886904-887446 bp Ori: OES81513.1 Feature: domain Description: SpoT Location: 886910-887372 bp Feature: domain Description: SpoT Location: 88691 0-887372 bp Feature: gene Location: 887514-888215 bp Ori: OES81514.1 Feature: domain Description: Cah Location: 887526-888210 bp Feature: domain Description: Cah Location: 887526-88821 0 bp Feature: gene Location: 888379-890070 bp Ori: OES81515.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 888505-889105 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 888505-8891 05 bp Feature: gene Location: 890503-891687 bp Ori: OES81516.1 Feature: domain Description: HipB Location: 890512-890773 bp Feature: domain Description: HipB Location: 89051 2-890773 bp Feature: domain Description: ImmA Location: 890926-891550 bp Feature: domain Description: ImmA Location: 890926-891 550 bp Feature: gene Location: 891720-892481 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpoT (COG0317), Cah (COG3338), RVT-Retrons, HipB (COG1396), ImmA (COG2856)

Seq: MJSN01000019.1 Listeria monocytogenes strain BCW_2357 PROKKA_contig000019, whole genome shotgun sequence (256785 bp)
Overview 1 RT 1: 164572-170088 bp Neighborhood of RT #1 [164572, 170111] Cass2 SLATT_5 RVT-UG17 GlpR ALDH_F6_MMSDH Feature: gene Location: 164572-164991 bp Ori: OES83864.1 Feature: domain Description: Cass2 Location: 164584-164980 bp Feature: domain Description: Cass2 Location: 164584-164980 bp Feature: gene Location: 165307-165906 bp Ori: OES83865.1 Feature: domain Description: SLATT_5 Location: 165340-165886 bp Feature: domain Description: SLATT_5 Location: 165340-165886 bp Feature: gene Location: 165903-167261 bp Ori: OES83866.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 166128-166701 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 16612 8-166701 bp Feature: gene Location: 167689-168450 bp Ori: OES83867.1 Feature: domain Description: GlpR Location: 167695-168439 bp Feature: domain Description: GlpR Location: 167695-168439 bp Feature: gene Location: 168645-170111 bp Ori: OES83868.1 Feature: domain Description: ALDH_F6_MMSDH Location: 168669-170088 bp Feature: domain Description: ALDH_F6_MMSDH Location: 168669-170088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cass2 (pfam14526), SLATT_5 (pfam18160), RVT-UG17, GlpR (COG1349), ALDH_F6_MMSDH (cd07085)