myRT

myRT report for GCA_001753165.1_ASM175316v1

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Seq: CP017448.1 Acidihalobacter prosperus strain V6 sequence (3363634 bp)
Overview 1 RT 1: 502793-507929 bp 2 RT 2: 1554560-1558087 bp 3 RT 3: 2973608-2977463 bp Neighborhood of RT #1 [502793, 508123] YncA ligand_gated_channel RVT-GII GIIM Neighborhood of RT #2 [1554560, 1558087] Acetyltransf_1 RVT-CRISPR Cas_Cas1 Neighborhood of RT #3 [2973608, 2977463] RVT-GII GIIM HTH_23 Feature: gene Location: 502793-503311 bp Ori: AOV16060.1 Feature: domain Description: YncA Location: 502817-503297 bp Feature: domain Description: YncA Location: 50281 7-503297 bp Feature: gene Location: 503742-505934 bp Ori: AOV18369.1 Feature: domain Description: ligand_gated_channel Location: 503937-505929 bp Feature: domain Description: ligand_gated_channel Location: 503937-505929 bp Feature: gene Location: 506768-508123 bp Ori: AOV16061.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 507068-507686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 507068-507686 bp Feature: domain Description: GIIM Note: maturase Location: 507731-507929 bp Feature: domain Description: GIIM Note: maturase Location: 507731 -507929 bp Feature: gene Location: 1554560-1555087 bp Ori: AOV16851.1 Feature: domain Description: Acetyltransf_1 Location: 1554680-1555010 bp Feature: domain Description: Acetyltransf_1 Location: 1 554680-1 55501 0 bp Feature: gene Location: 1555661-1556008 bp Feature: gene Location: 1556175-1557019 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1556361-1556847 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 556361 -1 556847 bp Feature: gene Location: 1557028-1557732 bp Ori: AOV16853.1 Feature: domain Description: Cas_Cas1 Location: 1557061-1557553 bp Feature: domain Description: Cas_Cas1 Location: 1 557061 -1 557553 bp Feature: gene Location: 1557869-1558087 bp Feature: gene Location: 2973608-2974489 bp Feature: gene Location: 2974836-2975204 bp Feature: gene Location: 2975422-2976360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2975497-2975923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2975497-2975923 bp Feature: domain Description: GIIM Note: maturase Location: 2975968-2976169 bp Feature: domain Description: GIIM Note: maturase Location: 2975968-29761 69 bp Feature: gene Location: 2976579-2976875 bp Ori: AOV17991.1 Feature: domain Description: HTH_23 Location: 2976585-2976720 bp Feature: domain Description: HTH_23 Location: 2976585-2976720 bp Feature: gene Location: 2977188-2977463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YncA (COG1247), ligand_gated_channel (cd01347), RVT-GII, GIIM (pfam08388), Acetyltransf_1 (pfam00583), RVT-CRISPR, Cas_Cas1 (pfam01867), HTH_23 (pfam13384)