myRT

myRT report for GCA_001753855.1_ASM175385v1

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Seq: BCAQ01000169.1 Pseudomonas sp. GTC 16473 DNA, contig: PPU36_CON00169, whole genome shotgun sequence (4458 bp)
Overview 1 RT 1: 1361-4456 bp Neighborhood of RT #1 [1361, 4456] HTH_3 RVT-UG15 Feature: gene Location: 1361-1726 bp Feature: domain Description: HTH_3 Location: 1487-1586 bp Feature: domain Description: HTH_3 Location: 1 487-1 586 bp Feature: gene Location: 1850-1990 bp Feature: gene Location: 2136-3818 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 2583-2991 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 2583-2991 bp Feature: gene Location: 3829-3990 bp Feature: gene Location: 4172-4456 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_3 (pfam01381), RVT-UG15

Seq: BCAQ01000199.1 Pseudomonas sp. GTC 16473 DNA, contig: PPU36_CON00199, whole genome shotgun sequence (1226 bp)
Overview 1 RT 1: 288-1224 bp Neighborhood of RT #1 [288, 1223] RVT_N RVT-GII Feature: gene Location: 288-1223 bp Feature: domain Description: RVT_N Location: 345-588 bp Feature: domain Description: RVT_N Location: 345-588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 633-1224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 633-12 2 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: BCAQ01000200.1 Pseudomonas sp. GTC 16473 DNA, contig: PPU36_CON00200, whole genome shotgun sequence (1162 bp)
Overview 1 RT 1: 71-992 bp Neighborhood of RT #1 [71, 1159] RVT-GII GIIM Feature: gene Location: 71-1159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95-710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95-710 bp Feature: domain Description: GIIM Note: maturase Location: 764-992 bp Feature: domain Description: GIIM Note: maturase Location: 764-992 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)