myRT

myRT report for GCA_001753895.1_ASM175389v1

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Seq: BCAW01000007.1 Pseudomonas sp. NBRC 111120 DNA, contig: PP5_CON00301, whole genome shotgun sequence (143135 bp)
Overview 1 RT 1: 51-2371 bp Neighborhood of RT #1 [51, 2385] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 51-1208 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 300-984 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 300-984 bp Feature: gene Location: 1407-1760 bp Feature: domain Description: Avd_like Location: 1434-1740 bp Feature: domain Description: Avd_like Location: 1 434-1 740 bp Feature: gene Location: 1813-2385 bp Feature: domain Description: DUF1566 Location: 2143-2371 bp Feature: domain Description: DUF1 566 Location: 21 43-2371 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), DUF1566 (pfam07603), RVT-DGRs

Seq: BCAW01000172.1 Pseudomonas sp. NBRC 111120 DNA, contig: PP5_CON09701, whole genome shotgun sequence (9831 bp)
Overview 1 RT 1: 1-5344 bp Neighborhood of RT #1 [1, 5370] RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 1-1380 bp Feature: gene Location: 1582-1809 bp Feature: gene Location: 1935-3527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2439-3129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 439-312 9 bp Feature: gene Location: 3488-3793 bp Feature: gene Location: 3835-5370 bp Feature: domain Description: LZ_Tnp_IS66 Location: 3943-4156 bp Feature: domain Description: LZ_Tnp_IS66 Location: 3943-4156 bp Feature: domain Description: zf-IS66 Location: 4186-4309 bp Feature: domain Description: zf-IS66 Location: 4186-4309 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4354-5209 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4354-52 09 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 5230-5344 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 52 30-5344 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)