myRT

myRT report for GCA_001756925.1_ASM175692v1

Download annotations/find similar RTs

Seq: MCNU01000018.1 Streptomyces fradiae strain Olg4R contig00021, whole genome shotgun sequence (124194 bp)
Overview 1 RT 1: 106381-113991 bp Neighborhood of RT #1 [106381, 115142] Trypsin KOG3637 FG-GAP_2 Int_alpha RVT-GII GIIM GT4_AmsD-like GT4_AmsD-like Feature: gene Location: 106381-108486 bp Ori: OFA58959.1 Feature: domain Description: Trypsin Location: 106429-107047 bp Feature: domain Description: Trypsin Location: 1 06429-1 07047 bp Feature: domain Description: KOG3637 Location: 107074-107407 bp Feature: domain Description: KOG3637 Location: 1 07074-1 07407 bp Feature: domain Description: FG-GAP_2 Location: 107644-107728 bp Feature: domain Description: FG-GAP_2 Location: 1 07644-1 07728 bp Feature: domain Description: Int_alpha Location: 107845-108013 bp Feature: domain Description: Int_alpha Location: 1 07845-1 0801 3 bp Feature: gene Location: 108993-109801 bp Feature: gene Location: 110038-111417 bp Ori: OFA58940.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110356-110986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 0356-1 1 0986 bp Feature: domain Description: GIIM Note: maturase Location: 111073-111280 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 1 073-1 1 1 280 bp Feature: gene Location: 112325-112621 bp Feature: gene Location: 112806-115142 bp Ori: OFA58942.1 Feature: domain Description: GT4_AmsD-like Location: 112812-113793 bp Feature: domain Description: GT4_AmsD-like Location: 1 1 281 2-1 1 3793 bp Feature: domain Description: GT4_AmsD-like Location: 113865-113991 bp Feature: domain Description: GT4_AmsD-like Location: 1 1 3865-1 1 3991 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Trypsin (pfam00089), KOG3637 (KOG3637, Vitronectin receptor, alpha subunit ), FG-GAP_2 (pfam14312), Int_alpha (smart00191), RVT-GII, GIIM (pfam08388), GT4_AmsD-like (cd03820)

Seq: MCNU01000034.1 Streptomyces fradiae strain Olg4R contig00039, whole genome shotgun sequence (167001 bp)
Overview 1 RT 1: 124150-134298 bp Neighborhood of RT #1 [124150, 134298] TPR TPR TPR TPR CHAT HTH_29 RVT-GII KOG4768 IS285 Feature: gene Location: 124150-128877 bp Ori: OFA55761.1 Feature: domain Description: TPR Location: 124516-125296 bp Feature: domain Description: TPR Location: 12 4516-12 52 96 bp Feature: domain Description: TPR Location: 125410-125683 bp Feature: domain Description: TPR Location: 12 5410-12 5683 bp Feature: domain Description: TPR Location: 125752-126697 bp Feature: domain Description: TPR Location: 12 5752 -12 6697 bp Feature: domain Description: TPR Location: 126805-127444 bp Feature: domain Description: TPR Location: 12 6805-12 7444 bp Feature: domain Description: CHAT Location: 127981-128872 bp Feature: domain Description: CHAT Location: 12 7981-12 8872 bp Feature: gene Location: 129003-130119 bp Feature: domain Description: HTH_29 Location: 129105-129282 bp Feature: domain Description: HTH_2 9 Location: 12 9105-12 92 82 bp Feature: gene Location: 131123-132514 bp Ori: OFA55762.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131387-132083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131387-132 083 bp Feature: domain Description: KOG4768 Location: 132191-132329 bp Feature: domain Description: KOG4768 Location: 132 191-132 32 9 bp Feature: gene Location: 132627-133859 bp Feature: domain Description: IS285 Location: 132738-133836 bp Feature: domain Description: IS2 85 Location: 132 738-133836 bp Feature: gene Location: 133909-134298 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), CHAT (pfam12770), HTH_29 (pfam13551), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), IS285 (COG3328)

Seq: MCNU01000286.1 Streptomyces fradiae strain Olg4R contig00301, whole genome shotgun sequence (2077 bp)
Overview 1 RT 1: 597-1845 bp Neighborhood of RT #1 [597, 1979] RVT-GII GIIM Feature: gene Location: 597-1979 bp Ori: OFA33916.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 915-1548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 915-1548 bp Feature: domain Description: GIIM Note: maturase Location: 1632-1845 bp Feature: domain Description: GIIM Note: maturase Location: 163 2-1845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)