myRT

myRT report for GCA_001757875.1_ASM175787v1

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Seq: LXLW01000034.1 Bacillus mycoides strain GOE12 BWGOE12_contig000034, whole genome shotgun sequence (451786 bp)
Overview 1 RT 1: 24032-29880 bp Neighborhood of RT #1 [24032, 29885] PRK13922 PRK13927 RVT-GII Intron_maturas2 HNHc RadC PRK00148 Feature: gene Location: 24032-24883 bp Feature: domain Description: PRK13922 Location: 24038-24860 bp Feature: domain Description: PRK1 3922 Location: 24038-24860 bp Feature: gene Location: 24925-25944 bp Feature: domain Description: PRK13927 Location: 24943-25933 bp Feature: domain Description: PRK1 3927 Location: 24943-25933 bp Feature: gene Location: 26410-28221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26674-27505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26674-27505 bp Feature: domain Description: Intron_maturas2 Location: 27586-27958 bp Feature: domain Description: Intron_maturas2 Location: 27586-27958 bp Feature: domain Description: HNHc Note: nucleases Location: 28036-28192 bp Feature: domain Description: HNHc Note: nucleases Location: 28036-281 92 bp Feature: gene Location: 28774-29259 bp Feature: domain Description: RadC Location: 28786-29254 bp Feature: domain Description: RadC Location: 28786-29254 bp Feature: gene Location: 29310-29885 bp Feature: domain Description: PRK00148 Location: 29319-29880 bp Feature: domain Description: PRK001 48 Location: 2931 9-29880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13922 (rod shape-determining protein MreC; Provisional), PRK13927 (rod shape-determining protein MreB; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), RadC (pfam04002), PRK00148 (Maf-like protein; Reviewed)

Seq: LXLW01000021.1 Bacillus mycoides strain GOE12 BWGOE12_contig000021, whole genome shotgun sequence (19287 bp)
Overview 1 RT 1: 13230-18952 bp Neighborhood of RT #1 [13230, 18952] T_den_put_tspse DUF2568 RVT-GII HNHc Feature: gene Location: 13230-14126 bp Feature: domain Description: T_den_put_tspse Location: 13263-14115 bp Feature: domain Description: T_den_put_tspse Location: 132 63-14115 bp Feature: gene Location: 14776-15138 bp Feature: domain Description: DUF2568 Location: 14821-15085 bp Feature: domain Description: DUF2 568 Location: 1482 1-15085 bp Feature: gene Location: 15944-17761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16244-16943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162 44-16943 bp Feature: domain Description: HNHc Note: nucleases Location: 17516-17651 bp Feature: domain Description: HNHc Note: nucleases Location: 17516-17651 bp Feature: gene Location: 18074-18952 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T_den_put_tspse (TIGR01784), DUF2568 (pfam10823), RVT-GII, HNHc (smart00507)

Seq: LXLW01000098.1 Bacillus mycoides strain GOE12 BWGOE12_contig000098, whole genome shotgun sequence (1865 bp)
Overview 1 RT 1: 146-1370 bp Neighborhood of RT #1 [146, 1453] RVT-GII GIIM Feature: gene Location: 146-1453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431-1070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 1-1070 bp Feature: domain Description: GIIM Note: maturase Location: 1145-1370 bp Feature: domain Description: GIIM Note: maturase Location: 1145-13 70 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LXLW01000030.1 Bacillus mycoides strain GOE12 BWGOE12_contig000030, whole genome shotgun sequence (78609 bp)
Overview 1 RT 1: 70703-76419 bp Neighborhood of RT #1 [70703, 76419] AAA_10 RVT-GII HNHc AAA_10 Feature: gene Location: 70703-71185 bp Feature: gene Location: 71187-72065 bp Feature: domain Description: AAA_10 Location: 71193-71949 bp Feature: domain Description: AAA_10 Location: 71193-7194 9 bp Feature: gene Location: 72320-74146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72620-73319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72620-73319 bp Feature: domain Description: HNHc Note: nucleases Location: 73892-74030 bp Feature: domain Description: HNHc Note: nucleases Location: 73892-74 030 bp Feature: gene Location: 74884-76026 bp Feature: domain Description: AAA_10 Location: 75832-76009 bp Feature: domain Description: AAA_10 Location: 75832-76009 bp Feature: gene Location: 76057-76419 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_10 (pfam12846), RVT-GII, HNHc (smart00507)