myRT

myRT report for GCA_001757915.1_ASM175791v1

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Seq: LXLO01000063.1 Bacillus mycoides strain GOE3 BWGOE3_contig000063, whole genome shotgun sequence (1068979 bp)
Overview 1 RT 1: 664282-670130 bp Neighborhood of RT #1 [664282, 670135] PRK13922 PRK13927 RVT-GII Intron_maturas2 HNHc RadC PRK00148 Feature: gene Location: 664282-665133 bp Feature: domain Description: PRK13922 Location: 664288-665110 bp Feature: domain Description: PRK1 3922 Location: 664288-6651 1 0 bp Feature: gene Location: 665175-666194 bp Feature: domain Description: PRK13927 Location: 665193-666183 bp Feature: domain Description: PRK1 3927 Location: 6651 93-6661 83 bp Feature: gene Location: 666660-668471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 666924-667755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 666924-667755 bp Feature: domain Description: Intron_maturas2 Location: 667836-668208 bp Feature: domain Description: Intron_maturas2 Location: 667836-668208 bp Feature: domain Description: HNHc Note: nucleases Location: 668286-668442 bp Feature: domain Description: HNHc Note: nucleases Location: 668286-668442 bp Feature: gene Location: 669024-669509 bp Feature: domain Description: RadC Location: 669036-669504 bp Feature: domain Description: RadC Location: 669036-669504 bp Feature: gene Location: 669560-670135 bp Feature: domain Description: PRK00148 Location: 669569-670130 bp Feature: domain Description: PRK001 48 Location: 669569-6701 30 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13922 (rod shape-determining protein MreC; Provisional), PRK13927 (rod shape-determining protein MreB; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), RadC (pfam04002), PRK00148 (Maf-like protein; Reviewed)

Seq: LXLO01000085.1 Bacillus mycoides strain GOE3 BWGOE3_contig000085, whole genome shotgun sequence (1774 bp)
Overview 1 RT 1: 146-1370 bp Neighborhood of RT #1 [146, 1453] RVT-GII GIIM Feature: gene Location: 146-1453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431-1070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431-1070 bp Feature: domain Description: GIIM Note: maturase Location: 1145-1370 bp Feature: domain Description: GIIM Note: maturase Location: 1145-1370 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LXLO01000117.1 Bacillus mycoides strain GOE3 BWGOE3_contig000117, whole genome shotgun sequence (2611 bp)
Overview 1 RT 1: 99-1752 bp Neighborhood of RT #1 [99, 1868] RVT-GII HNHc Feature: gene Location: 99-1868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 357-1053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 57-1053 bp Feature: domain Description: HNHc Note: nucleases Location: 1614-1752 bp Feature: domain Description: HNHc Note: nucleases Location: 1614-1752 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: LXLO01000056.1 Bacillus mycoides strain GOE3 BWGOE3_contig000056, whole genome shotgun sequence (46468 bp)
Overview 1 RT 1: 168-4241 bp Neighborhood of RT #1 [168, 4255] CwlT_like RVT-GII Intron_maturas2 HNHc YutE Y1_Tnp Feature: gene Location: 168-440 bp Feature: domain Description: CwlT_like Location: 174-432 bp Feature: domain Description: CwlT_like Location: 174 -4 32 bp Feature: gene Location: 1017-2840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1281-2115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1281-2115 bp Feature: domain Description: Intron_maturas2 Location: 2187-2532 bp Feature: domain Description: Intron_maturas2 Location: 2187-2532 bp Feature: domain Description: HNHc Note: nucleases Location: 2661-2817 bp Feature: domain Description: HNHc Note: nucleases Location: 2661-2817 bp Feature: gene Location: 3163-3576 bp Feature: domain Description: YutE Location: 3169-3565 bp Feature: domain Description: YutE Location: 3169-3565 bp Feature: gene Location: 3857-4255 bp Feature: domain Description: Y1_Tnp Location: 3893-4241 bp Feature: domain Description: Y1_Tnp Location: 3893-4 24 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), CwlT_like, Y1_Tnp (pfam01797)

Seq: LXLO01000099.1 Bacillus mycoides strain GOE3 BWGOE3_contig000099, whole genome shotgun sequence (2647 bp)
Overview 1 RT 1: 89-1796 bp Neighborhood of RT #1 [89, 1906] RVT-GII HNHc Feature: gene Location: 89-1906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 389-1088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 389-1088 bp Feature: domain Description: HNHc Note: nucleases Location: 1661-1796 bp Feature: domain Description: HNHc Note: nucleases Location: 1661-1796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)