myRT

myRT report for GCA_001757985.1_ASM175798v1

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Seq: LXLS01000106.1 Bacillus mycoides strain GOE7 BWGOE7_contig000106, whole genome shotgun sequence (19287 bp)
Overview 1 RT 1: 336-6047 bp Neighborhood of RT #1 [336, 6058] RVT-GII HNHc DUF2568 T_den_put_tspse Feature: gene Location: 336-1214 bp Feature: gene Location: 1527-3344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1827-2526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 827-2526 bp Feature: domain Description: HNHc Note: nucleases Location: 3099-3234 bp Feature: domain Description: HNHc Note: nucleases Location: 3099-3234 bp Feature: gene Location: 4150-4512 bp Feature: domain Description: DUF2568 Location: 4195-4459 bp Feature: domain Description: DUF2568 Location: 41 95-4459 bp Feature: gene Location: 5162-6058 bp Feature: domain Description: T_den_put_tspse Location: 5195-6047 bp Feature: domain Description: T_den_put_tspse Location: 51 95-6047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), T_den_put_tspse (TIGR01784)

Seq: LXLS01000117.1 Bacillus mycoides strain GOE7 BWGOE7_contig000117, whole genome shotgun sequence (1865 bp)
Overview 1 RT 1: 413-1637 bp Neighborhood of RT #1 [413, 1720] RVT-GII GIIM Feature: gene Location: 413-1720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 698-1337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 698-1337 bp Feature: domain Description: GIIM Note: maturase Location: 1412-1637 bp Feature: domain Description: GIIM Note: maturase Location: 1412 -1637 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LXLS01000041.1 Bacillus mycoides strain GOE7 BWGOE7_contig000041, whole genome shotgun sequence (67100 bp)
Overview 1 RT 1: 59199-64915 bp Neighborhood of RT #1 [59199, 64915] AAA_10 RVT-GII HNHc AAA_10 Feature: gene Location: 59199-59681 bp Feature: gene Location: 59683-60561 bp Feature: domain Description: AAA_10 Location: 59689-60445 bp Feature: domain Description: AAA_10 Location: 59689-60445 bp Feature: gene Location: 60816-62642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61116-61815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61116-61815 bp Feature: domain Description: HNHc Note: nucleases Location: 62388-62526 bp Feature: domain Description: HNHc Note: nucleases Location: 623 88-62526 bp Feature: gene Location: 63380-64522 bp Feature: domain Description: AAA_10 Location: 64328-64505 bp Feature: domain Description: AAA_10 Location: 643 28-64505 bp Feature: gene Location: 64553-64915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_10 (pfam12846), RVT-GII, HNHc (smart00507)

Seq: LXLS01000050.1 Bacillus mycoides strain GOE7 BWGOE7_contig000050, whole genome shotgun sequence (401604 bp)
Overview 1 RT 1: 167847-173695 bp Neighborhood of RT #1 [167847, 173700] PRK13922 PRK13927 RVT-GII Intron_maturas2 HNHc RadC PRK00148 Feature: gene Location: 167847-168698 bp Feature: domain Description: PRK13922 Location: 167853-168675 bp Feature: domain Description: PRK13922 Location: 167853-168675 bp Feature: gene Location: 168740-169759 bp Feature: domain Description: PRK13927 Location: 168758-169748 bp Feature: domain Description: PRK13927 Location: 168758-16974 8 bp Feature: gene Location: 170225-172036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 170489-171320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1704 89-171320 bp Feature: domain Description: Intron_maturas2 Location: 171401-171773 bp Feature: domain Description: Intron_maturas2 Location: 1714 01-171773 bp Feature: domain Description: HNHc Note: nucleases Location: 171851-172007 bp Feature: domain Description: HNHc Note: nucleases Location: 171851-172007 bp Feature: gene Location: 172589-173074 bp Feature: domain Description: RadC Location: 172601-173069 bp Feature: domain Description: RadC Location: 172601-173069 bp Feature: gene Location: 173125-173700 bp Feature: domain Description: PRK00148 Location: 173134-173695 bp Feature: domain Description: PRK0014 8 Location: 173134 -173695 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13922 (rod shape-determining protein MreC; Provisional), PRK13927 (rod shape-determining protein MreB; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), RadC (pfam04002), PRK00148 (Maf-like protein; Reviewed)